RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

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Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CAMK2DQ13557 499 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 AGAP6Q5VW22 663 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 DEF8Q6ZN54 512 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 DNM1P46Q6ZS02 220 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 SLC35D2Q76EJ3 337 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 VTCN1Q7Z7D3 282 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 TMEM255BQ8WV15 326 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 TMEM54Q969K7 222 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 TPD52L3Q96J77 140 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 PRRC1Q96M27 445 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 KATNB1Q9BVA0 655 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 B3GAT2Q9NPZ5 323 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 CBLN4Q9NTU7 201 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 B3GNT2Q9NY97 397 aa11.37□□□□□ -0.59
USE1-207ENST00000596136 C11orf98E9PRG8 122 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 M0R3G1 203 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 KPNA4O00629 521 aaPredicted RBP11.36□□□□□ -0.59
USE1-207ENST00000596136 OR7A10O76100 309 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 HIST1H2ABP04908 130 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 FUT1P19526 365 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 CDKN1AP38936 164 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 GYS2P54840 703 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 BIDP55957 195 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 ST3GAL3Q11203 375 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 FXNQ16595 210 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 HIST3H3Q16695 136 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 HIST3H2AQ7L7L0 130 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 CIARTQ8N365 385 aaPredicted RBP11.36□□□□□ -0.59
USE1-207ENST00000596136 MUC15Q8N387 334 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 PFN4Q8NHR9 129 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 GEMIN6Q8WXD5 167 aaKnown RBP11.36□□□□□ -0.59
USE1-207ENST00000596136 HIST1H2ACQ93077 130 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 GTPBP3Q969Y2 492 aaKnown RBP11.36□□□□□ -0.59
USE1-207ENST00000596136 SGTBQ96EQ0 304 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 SLC25A44Q96H78 314 aaPredicted RBP11.36□□□□□ -0.59
USE1-207ENST00000596136 SEPHS2Q99611 448 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 FAM107BQ9H098 131 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 GSX1Q9H4S2 264 aaPredicted RBP11.36□□□□□ -0.59
USE1-207ENST00000596136 MAN2C1Q9NTJ4 1040 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 C20orf141Q9NUB4 165 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 MOKQ9UQ07 419 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 SNX13Q9Y5W8 968 aa11.36□□□□□ -0.59
USE1-207ENST00000596136 ZNF503-AS2A6NEH8 195 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 NPIPB13A6NJU9 1138 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 CENPBD1B2RD01 187 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 NPIPB4C9JG80 1138 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 ATP6V1G2-DDX39BF2Z307 99 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 FFAR1O14842 300 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 RNF13O43567 381 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 PRSS23O95084 383 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 IGHV4-39P01824 125 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 IFNW1P05000 195 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 CECR9P0C854 216 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 PGA4P0DJD7 388 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 PGA3P0DJD8 388 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 FUT4P22083 530 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
USE1-207ENST00000596136 ARR3P36575 388 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 CSNK1A1P48729 337 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 FABP6P51161 128 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 GNGT1P63211 74 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 TUBA1BP68363 451 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 TUBA4AP68366 448 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 NAAAQ02083 359 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 RPL18Q07020 188 aaKnown RBP11.35□□□□□ -0.59
USE1-207ENST00000596136 CARD17Q5XLA6 110 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 LRFN4Q6PJG9 635 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 TUBA1AQ71U36 451 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 NANOGNBQ7Z5D8 188 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 TSEN54Q7Z6J9 526 aaKnown RBP11.35□□□□□ -0.59
USE1-207ENST00000596136 OFCC1Q8IZS5 231 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 FBXL14Q8N1E6 418 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 OR6N1Q8NGY5 312 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 ZNF75AQ96N20 296 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 KCTD14Q9BQ13 255 aaPredicted RBP11.35□□□□□ -0.59
USE1-207ENST00000596136 MRPL13Q9BYD1 178 aaKnown RBP11.35□□□□□ -0.59
USE1-207ENST00000596136 DENND2DQ9H6A0 471 aaPredicted RBP11.35□□□□□ -0.59
USE1-207ENST00000596136 SPAG4Q9NPE6 437 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 GLTPQ9NZD2 209 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 POU2F3Q9UKI9 436 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 ARL2BPQ9Y2Y0 163 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 MED31Q9Y3C7 131 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 ATP23Q9Y6H3 246 aa11.35□□□□□ -0.59
USE1-207ENST00000596136 TRIM64A6NGJ6 449 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 TRIM64BA6NI03 449 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 BLOC1S5-TXNDC5H3BN57 136 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 H7C1Q1 480 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 H7C417 338 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 GSTA4O15217 222 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 ZNF682O95780 498 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 BCL10O95999 233 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 SERPINA1P01009 418 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 CRYAAP02489 173 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 UMPSP11172 480 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 IFNA8P32881 189 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 ZNF133P52736 654 aaPredicted RBP11.34□□□□□ -0.59
USE1-207ENST00000596136 TRAM2Q15035 370 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 SWI5Q1ZZU3 235 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 MST1LQ2TV78 715 aa11.34□□□□□ -0.59
USE1-207ENST00000596136 IFI44LQ53G44 452 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms