RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 TMEM249Q2WGJ8 235 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 OR7E24Q6IFN5 339 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 PODNL1Q6PEZ8 512 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 H1FNTQ75WM6 255 aaPredicted RBP10.91□□□□□ -0.66
UPF1-203ENST00000594504 GPAT4Q86UL3 456 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 DEPDC4Q8N2C3 294 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 C10orf53Q8N6V4 93 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 ZIC4Q8N9L1 334 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 SCAIQ8N9R8 606 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 ADPRHL1Q8NDY3 354 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 OR9K2Q8NGE7 335 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 ZNF417Q8TAU3 575 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 NSMCE2Q96MF7 247 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 ZNF385AQ96PM9 386 aaKnown RBP10.91□□□□□ -0.66
UPF1-203ENST00000594504 TNFRSF13CQ96RJ3 184 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 ZNF587Q96SQ5 575 aaPredicted RBP10.91□□□□□ -0.66
UPF1-203ENST00000594504 PRSS27Q9BQR3 290 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 MUC13Q9H3R2 512 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 PARPBPQ9NWS1 579 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 A4GNTQ9UNA3 340 aa10.91□□□□□ -0.66
UPF1-203ENST00000594504 ABCA1O95477 2261 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 ATP6V1G2-DDX39BF2Z307 99 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 IGF2P01344 180 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 GRPRP30550 384 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 LGALS3BPQ08380 585 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 CHRFAM7AQ494W8 412 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 DNAL1Q4LDG9 190 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 C6orf52Q5T4I8 152 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 CLEC2AQ6UVW9 174 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 SSX8Q7RTT4 187 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 AAED1Q7RTV5 226 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 CYP4Z1Q86W10 505 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 NKAIN4Q8IVV8 208 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 OFCC1Q8IZS5 231 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 FAM168AQ92567 244 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 TMEM45BQ96B21 275 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 FNDC11Q9BVV2 318 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 ASPNQ9BXN1 380 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 ACTR3BQ9P1U1 418 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 SEC14L4Q9UDX3 406 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 MOKQ9UQ07 419 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 ENPP4Q9Y6X5 453 aa10.9□□□□□ -0.66
UPF1-203ENST00000594504 NSD1Q96L73 2696 aaPredicted RBP10.89□□□□□ -0.67
UPF1-203ENST00000594504 LOC102725191A0A1B0GVB3 256 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 KPNA4O00629 521 aaPredicted RBP10.89□□□□□ -0.67
UPF1-203ENST00000594504 IFNA2P01563 188 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 MT-ND1P03886 318 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 NQO1P15559 274 aaKnown RBP10.89□□□□□ -0.67
UPF1-203ENST00000594504 CBLP22681 906 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 APOBEC3AP31941 199 aaPredicted RBP10.89□□□□□ -0.67
UPF1-203ENST00000594504 YAP1P46937 504 aaKnown RBP10.89□□□□□ -0.67
UPF1-203ENST00000594504 LOXL1Q08397 574 aaPredicted RBP10.89□□□□□ -0.67
UPF1-203ENST00000594504 PMS2P3Q13401 168 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 ZNF74Q16587 644 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 MST1LQ2TV78 715 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 HIKESHIQ53FT3 197 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 MTX3Q5HYI7 312 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 CREB3L2Q70SY1 520 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 FAM86B1Q8N7N1 296 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 ARIH2OSQ8N7S6 290 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 C10orf105Q8TEF2 133 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 TMEM255BQ8WV15 326 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 FBXO17Q96EF6 278 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 PYURFQ96I23 114 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 OXGR1Q96P68 337 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 MOGAT1Q96PD6 335 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 KCNK17Q96T54 332 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 FKRPQ9H9S5 495 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 MRPL39Q9NYK5 338 aaKnown RBP10.89□□□□□ -0.67
UPF1-203ENST00000594504 AMDHD2Q9Y303 409 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 MED31Q9Y3C7 131 aa10.89□□□□□ -0.67
UPF1-203ENST00000594504 FAM32AQ9Y421 112 aaKnown RBP10.89□□□□□ -0.67
UPF1-203ENST00000594504 CUBNO60494 3623 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 HTR3EA5X5Y0 456 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 LRRN3E7EW58 273 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 H7C417 338 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 J3KTA2 159 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 FFAR1O14842 300 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 GYG2O15488 501 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 PDE5AO76074 875 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 PRSS23O95084 383 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 CH25HO95992 272 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 IGHV4-31P0DP07 118 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 ZNF43P17038 809 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 ITGA2P17301 1181 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 RHCEP18577 417 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 MPGP29372 298 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 UGT2B15P54855 530 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 DSCR9P59020 149 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 PRPS1P60891 318 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 TUBA1BP68363 451 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 TUBA4AP68366 448 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 SRSF2Q01130 221 aaKnown RBP10.88□□□□□ -0.67
UPF1-203ENST00000594504 PUDPQ08623 228 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 BNIP1Q12981 228 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 C1DQ13901 141 aaKnown RBP10.88□□□□□ -0.67
UPF1-203ENST00000594504 TRIM25Q14258 630 aaKnown RBP10.88□□□□□ -0.67
UPF1-203ENST00000594504 TRAM2Q15035 370 aa10.88□□□□□ -0.67
UPF1-203ENST00000594504 ZNF544Q6NX49 715 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms