RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ZFP64Q9NPA5 681 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 CMC2Q9NRP2 79 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 QPCTLQ9NXS2 382 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 BAIAP2Q9UQB8 552 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 CACNA1GO43497 2377 aa11.89□□□□□ -0.51
VRK3-205ENST00000593919 CTDSP2O14595 271 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 OPN1LWP04000 364 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 F13BP05160 661 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 GRPRP30550 384 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 HTR1FP30939 366 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SRD5A2P31213 254 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 ATP6V1E1P36543 226 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 RPS25P62851 125 aaKnown RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 ALG10Q5BKT4 473 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 NXNL2Q5VZ03 156 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 C22orf42Q6IC83 251 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 PLBD1Q6P4A8 553 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 ARHGAP11AQ6P4F7 1023 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 B3GLCTQ6Y288 498 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 DPY19L2P2Q6ZN68 376 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SULF2Q8IWU5 870 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 LRRC75AQ8NAA5 344 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 OR5J2Q8NH18 312 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SNIP1Q8TAD8 396 aaKnown RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 PPP1R14BQ96C90 147 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 CEP19Q96LK0 163 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 KATNB1Q9BVA0 655 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 BARHL1Q9BZE3 327 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 RNF32Q9H0A6 362 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SMURF1Q9HCE7 757 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 NRIP3Q9NQ35 241 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 TXNL4BQ9NX01 149 aaKnown RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 BOKQ9UMX3 212 aaPredicted RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 IER3IP1Q9Y5U9 82 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 KCNMB2Q9Y691 235 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 OR2M5A3KFT3 312 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 CDK2AP1O14519 115 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 CDRT1O95170 752 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SHC1P29353 583 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SFTPDP35247 375 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 TGM4P49221 684 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 ARG2P78540 354 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 ZNF45Q02386 682 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 DBPQ10586 325 aaPredicted RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 MYBPHQ13203 477 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 OR7A5Q15622 319 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SGCBQ16585 318 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 ZNF362Q5T0B9 420 aaPredicted RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 PLEKHG7Q6ZR37 379 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SLC22A16Q86VW1 577 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 LYSMD2Q8IV50 215 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 OR6S1Q8NH40 331 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 MFSD8Q8NHS3 518 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 ZNF417Q8TAU3 575 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 SLC25A43Q8WUT9 341 aaPredicted RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 HAS2Q92819 552 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 UFD1Q92890 307 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 ZNF587Q96SQ5 575 aaPredicted RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 POTEKPQ9BYX7 375 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 TPK1Q9H3S4 243 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 TAS2R5Q9NYW4 299 aa11.88□□□□□ -0.51
VRK3-205ENST00000593919 CRNNQ9UBG3 495 aaPredicted RBP11.88□□□□□ -0.51
VRK3-205ENST00000593919 A0A1W2PNR3 127 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 BOLA2-SMG1P6H3BVE0 249 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 NME2P1O60361 137 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 SP1P08047 785 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 HIST1H1CP16403 213 aaKnown RBP11.87□□□□□ -0.51
VRK3-205ENST00000593919 ZNF17P17021 662 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 NME2P22392 152 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 GDF1P27539 372 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 RFC3P40938 356 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 CTXN1P60606 82 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 ERVK-25P63136 954 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 GLYR1Q49A26 553 aaPredicted RBP11.87□□□□□ -0.51
VRK3-205ENST00000593919 SPANXN2Q5MJ10 180 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 FAM122BQ7Z309 247 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 GALNTL5Q7Z4T8 443 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 MINDY2Q8NBR6 621 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 OR51G2Q8NGK0 314 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 OR5B2Q96R09 309 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 PIGQQ9BRB3 760 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 ARHGAP9Q9BRR9 750 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 MRPL39Q9NYK5 338 aaKnown RBP11.87□□□□□ -0.51
VRK3-205ENST00000593919 TNFRSF10DQ9UBN6 386 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 EXOGQ9Y2C4 368 aaKnown RBP11.87□□□□□ -0.51
VRK3-205ENST00000593919 KLF13Q9Y2Y9 288 aaPredicted RBP11.87□□□□□ -0.51
VRK3-205ENST00000593919 PTPRQQ9UMZ3 2332 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 LIPT2A6NK58 231 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 RIIAD1A6NNX1 92 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 C11orf98E9PRG8 122 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 ARPC3O15145 178 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 RGS5O15539 181 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 CD14P08571 375 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 CLEC2LP0C7M8 214 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 ZNF3P17036 446 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 RORCP51449 518 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 MFSD13AQ14CX5 517 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 ZNF181Q2M3W8 571 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 TMEM176BQ3YBM2 270 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms