RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 NAAAQ02083 359 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 KRTAP1-1Q07627 177 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 CAMK2DQ13557 499 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 FBXL14Q8N1E6 418 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 PFN4Q8NHR9 129 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 TMEM255BQ8WV15 326 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 ZNF75AQ96N20 296 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 NANSQ9NR45 359 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 B3GNT2Q9NY97 397 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 ZNF224Q9NZL3 707 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 RIMS3Q9UJD0 308 aa17.54■□□□□ 0.4
CIRBP-239ENST00000592467 TLN2Q9Y4G6 2542 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 IGF2P01344 180 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 MT-ND1P03886 318 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 TSPAN19P0C672 248 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 IFNGR1P15260 489 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 CBR1P16152 277 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 APOBEC3AP31941 199 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-239ENST00000592467 RBM34P42696 430 aaKnown RBP17.53■□□□□ 0.4
CIRBP-239ENST00000592467 SELENOWP63302 87 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 SWI5Q1ZZU3 235 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 LRRC23Q53EV4 343 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-239ENST00000592467 DEF8Q6ZN54 512 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 SPATA21Q7Z572 469 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 OR6X1Q8NH79 312 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 TMEM54Q969K7 222 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 NOX3Q9HBY0 568 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 C20orf141Q9NUB4 165 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 A4GNTQ9UNA3 340 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 CSPG4Q6UVK1 2322 aa17.53■□□□□ 0.4
CIRBP-239ENST00000592467 FAM171A2A8MVW0 826 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 H7C417 338 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 IFNA14P01570 189 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 BIDP55957 195 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 TAS2R41P59536 307 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 HGFACQ04756 655 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 LIPEQ05469 1076 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 KRTAP21-3Q3LHN1 58 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 HACD2Q6Y1H2 254 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 SLC35D2Q76EJ3 337 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 ARPINQ7Z6K5 226 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 LIPHQ8WWY8 451 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 ELAC2Q9BQ52 826 aaKnown RBP17.52■□□□□ 0.4
CIRBP-239ENST00000592467 AP3M1Q9Y2T2 418 aa17.52■□□□□ 0.4
CIRBP-239ENST00000592467 NAV3Q8IVL0 2385 aa17.52■□□□□ 0.39
CIRBP-239ENST00000592467 SERPINI2O75830 405 aa17.51■□□□□ 0.39
CIRBP-239ENST00000592467 THRBP10828 461 aa17.51■□□□□ 0.39
CIRBP-239ENST00000592467 DRD4P21917 467 aa17.51■□□□□ 0.39
CIRBP-239ENST00000592467 SLC7A2P52569 658 aa17.51■□□□□ 0.39
CIRBP-239ENST00000592467 LSM11P83369 360 aaKnown RBP eCLIP17.51■□□□□ 0.39
CIRBP-239ENST00000592467 MDP1Q86V88 176 aa17.51■□□□□ 0.39
CIRBP-239ENST00000592467 TMEM239Q8WW34 195 aa17.51■□□□□ 0.39
CIRBP-239ENST00000592467 HTRA1Q92743 480 aa17.51■□□□□ 0.39
CIRBP-239ENST00000592467 ADAD1Q96M93 576 aaKnown RBP17.51■□□□□ 0.39
CIRBP-239ENST00000592467 HOPXQ9BPY8 73 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-239ENST00000592467 BARX1Q9HBU1 254 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-239ENST00000592467 MOV10Q9HCE1 1003 aaKnown RBP17.51■□□□□ 0.39
CIRBP-239ENST00000592467 SNX13Q9Y5W8 968 aa17.51■□□□□ 0.39
CIRBP-239ENST00000592467 A0A096LNT2 108 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 ZNF726A6NNF4 738 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 RNF223E7ERA6 249 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 OR7A10O76100 309 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 CRYAAP02489 173 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 GSK3BP49841 420 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 MELKQ14680 651 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 LRFN4Q6PJG9 635 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 VTCN1Q7Z7D3 282 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 CCDC36Q8IYA8 594 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 MAPK1IP1LQ8NDC0 245 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 TPD52L3Q96J77 140 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 HS6ST2Q96MM7 605 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 SEPHS2Q99611 448 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 FOXB1Q99853 325 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 ULBP2Q9BZM5 246 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 EFCAB1Q9HAE3 211 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 CA10Q9NS85 328 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 MAN2C1Q9NTJ4 1040 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 GLTPQ9NZD2 209 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 ABCD2Q9UBJ2 740 aa17.5■□□□□ 0.39
CIRBP-239ENST00000592467 FFAR1O14842 300 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 RNF13O43567 381 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 SSX4O60224 188 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 PIP5K1CO60331 668 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 SNX3O60493 162 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 OR6A2O95222 327 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 HLA-HP01893 362 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 PGA4P0DJD7 388 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 PGA3P0DJD8 388 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 FUT1P19526 365 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 ARR3P36575 388 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 CSNK1A1P48729 337 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 IDH3GP51553 393 aaPredicted RBP17.49■□□□□ 0.39
CIRBP-239ENST00000592467 RUNX1T1Q06455 604 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 RPL18Q07020 188 aaKnown RBP17.49■□□□□ 0.39
CIRBP-239ENST00000592467 ADIPOQQ15848 244 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 HIST3H3Q16695 136 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 ZNF813Q6ZN06 617 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 CBLL1Q75N03 491 aa17.49■□□□□ 0.39
CIRBP-239ENST00000592467 TSEN54Q7Z6J9 526 aaKnown RBP17.49■□□□□ 0.39
CIRBP-239ENST00000592467 NUP37Q8NFH4 326 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms