RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SOX7Q9BT81 388 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 SEC11CQ9BY50 192 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 ULBP3Q9BZM4 244 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 LHX9Q9NQ69 397 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 ARGFXA6NJG6 315 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 AP4M1O00189 453 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 CTDSPLO15194 276 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 BMP7P18075 431 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 CD34P28906 385 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 PRKXP51817 358 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 AWAT1Q58HT5 328 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 FAM76BQ5HYJ3 339 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 FRRS1Q6ZNA5 592 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 NPAS4Q8IUM7 802 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 GALNT16Q8N428 558 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 SLC25A43Q8WUT9 341 aaPredicted RBP13.88□□□□□ -0.19
CIRBP-228ENST00000590347 ZNRF4Q8WWF5 429 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 DCUN1D4Q92564 292 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 SLC41A3Q96GZ6 507 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 C19orf43Q9BQ61 176 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 VN1R3Q9BXE9 311 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 ZNF350Q9GZX5 532 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 ZDHHC6Q9H6R6 413 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 TMEM27Q9HBJ8 222 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 DYRK1BQ9Y463 629 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 EYSQ5T1H1 3165 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 SCN3AQ9NY46 2000 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 A0A087X0M5 115 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 A0A1B0GX30 115 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 TMEM72A0PK05 275 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 C5orf51A6NDU8 294 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 RNASEK-C17orf49H0YIS7 233 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 AMY2AP04746 511 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 DUSP2Q05923 314 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 ST3GAL3Q11203 375 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 INPP5JQ15735 1006 aaPredicted RBP13.88□□□□□ -0.19
CIRBP-228ENST00000590347 WDR88Q6ZMY6 472 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 OR6K6Q8NGW6 343 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 TM4SF18Q96CE8 201 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 SLC22A12Q96S37 553 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 SULT4A1Q9BR01 284 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 TMPRSS5Q9H3S3 457 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 PLEKHA1Q9HB21 404 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 NCDNQ9UBB6 729 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 V9GY05 133 aa13.88□□□□□ -0.19
CIRBP-228ENST00000590347 A0A087WV62 115 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 IFNA2P01563 188 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 CATP04040 527 aaKnown RBP13.87□□□□□ -0.19
CIRBP-228ENST00000590347 RPN2P04844 631 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 FOXK2Q01167 660 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 HGFACQ04756 655 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 DHRS2Q13268 280 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 MEF2DQ14814 521 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 CDK5R1Q15078 307 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 TMEM205Q6UW68 189 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 OR4S1Q8NGB4 309 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 OR5P2Q8WZ92 322 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 RAB3CQ96E17 227 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 TCEAL7Q9BRU2 100 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 GLIPR2Q9H4G4 154 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 ZDHHC8Q9ULC8 765 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 C4orf47A7E2U8 309 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 NEDD8-MDP1E9PL57 170 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 COCHO43405 550 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 ADH1AP07327 375 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 ACRP10323 421 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 RCC1P18754 421 aaPredicted RBP13.87□□□□□ -0.19
CIRBP-228ENST00000590347 ADRA2CP18825 462 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 RAB6AP20340 208 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 PSMB5P28074 263 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 RPS10P46783 165 aaKnown RBP13.87□□□□□ -0.19
CIRBP-228ENST00000590347 SIRPAP78324 504 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 KIAA0141Q14154 515 aaPredicted RBP13.87□□□□□ -0.19
CIRBP-228ENST00000590347 MST1LQ2TV78 715 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 GDPD4Q6W3E5 623 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 ACOT7LQ6ZUV0 252 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 OR4K14Q8NGD5 310 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 OR52L1Q8NGH7 329 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 CXorf40BQ96DE9 158 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 SEMA6CQ9H3T2 930 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 AMDHD2Q9Y303 409 aa13.87□□□□□ -0.19
CIRBP-228ENST00000590347 THSD7BQ9C0I4 1608 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 MSGN1A6NI15 193 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 ZNF208O43345 1280 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 FKTNO75072 461 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 IGHV2-5P01817 119 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 RAB5AP20339 215 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 AGAP20933 346 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 NANOS3P60323 173 aaKnown RBP13.86□□□□□ -0.19
CIRBP-228ENST00000590347 SKP1P63208 163 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 RSU1Q15404 277 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 ALKBH2Q6NS38 261 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 FAM83HQ6ZRV2 1179 aaPredicted RBP13.86□□□□□ -0.19
CIRBP-228ENST00000590347 UBAC2Q8NBM4 344 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 OR10AC1Q8NH08 325 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 GRHL3Q8TE85 626 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 THOC3Q96J01 351 aaKnown RBP13.86□□□□□ -0.19
CIRBP-228ENST00000590347 PRDM13Q9H4Q3 707 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 CAPN10Q9HC96 672 aa13.86□□□□□ -0.19
CIRBP-228ENST00000590347 B4GALT6Q9UBX8 382 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms