RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PRPS1P60891 318 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 MELKQ14680 651 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 C1orf146Q5VVC0 180 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 OR2T5Q6IEZ7 315 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 TMEM200AQ86VY9 491 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 P2RY8Q86VZ1 359 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 WFDC8Q8IUA0 241 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 OR6N1Q8NGY5 312 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 OR2T29Q8NH02 315 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 OR6X1Q8NH79 312 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 RSRC1Q96IZ7 334 aaKnown RBP18.75■□□□□ 0.59
ATG4D-212ENST00000590096 LRR1Q96L50 414 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 TNFRSF13CQ96RJ3 184 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 REEP1Q9H902 201 aa18.75■□□□□ 0.59
ATG4D-212ENST00000590096 M0R3G1 203 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 CDC42EP2O14613 210 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 CDH2P19022 906 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-212ENST00000590096 HOXC12P31275 282 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 CSNK1A1P48729 337 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 ERFP50548 548 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 HMGA2P52926 109 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 ROR2Q01974 943 aaKnown RBP18.74■□□□□ 0.59
ATG4D-212ENST00000590096 ZBED5Q49AG3 693 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 TIMM23BQ5SRD1 257 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 ALKBH2Q6NS38 261 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 C22orf34Q6ZV56 151 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 ASRGL1Q7L266 308 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 SSX8Q7RTT4 187 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 C20orf196Q8IYI0 205 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 LINC00471Q8N535 108 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 C1orf162Q8NEQ5 155 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-212ENST00000590096 ZNF566Q969W8 418 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 MUCL1Q96DR8 90 aa18.74■□□□□ 0.59
ATG4D-212ENST00000590096 SLC25A44Q96H78 314 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-212ENST00000590096 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-212ENST00000590096 STX18Q9P2W9 335 aaKnown RBP18.74■□□□□ 0.59
ATG4D-212ENST00000590096 SAMHD1Q9Y3Z3 626 aaKnown RBP18.74■□□□□ 0.59
ATG4D-212ENST00000590096 OR5H1A6NKK0 313 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 CST1P01037 141 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 THBDP07204 575 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 RPL4P36578 427 aaKnown RBP18.73■□□□□ 0.59
ATG4D-212ENST00000590096 LIMS1P48059 325 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 TAB1Q15750 504 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 GABRA6Q16445 453 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 ACKR1Q16570 336 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 LINGO2Q7L985 606 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 ASB10Q8WXI3 467 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 MUS81Q96NY9 551 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 TXNIPQ9H3M7 391 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 CRLF2Q9HC73 371 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 GPR35Q9HC97 309 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 NGBQ9NPG2 151 aa18.73■□□□□ 0.59
ATG4D-212ENST00000590096 ALPK2Q86TB3 2170 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 UNC119BA6NIH7 251 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 NPIPB13A6NJU9 1138 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 NPIPB4C9JG80 1138 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 RPL36A-HNRNPH2H7BZ11 118 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 GNGT2O14610 69 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 CTAG2O75638 210 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 CCNB2O95067 398 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 IGHG1P01857 330 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 SH3BGRP55822 239 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-212ENST00000590096 CLRN1P58418 232 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 CTXN1P60606 82 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 TOP3AQ13472 1001 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-212ENST00000590096 PPA1Q15181 289 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 ZER1Q7Z7L7 766 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 C17orf78Q8N4C9 275 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 POLDIP3Q9BY77 421 aaKnown RBP18.72■□□□□ 0.59
ATG4D-212ENST00000590096 ULBP2Q9BZM5 246 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 RASSF1Q9NS23 344 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 U3KQV3 271 aa18.72■□□□□ 0.59
ATG4D-212ENST00000590096 FKBP6O75344 327 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 NDUFB2O95178 105 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 FHL1Q13642 323 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 GK3PQ14409 553 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 CEACAM16Q2WEN9 425 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 PHYHD1Q5SRE7 291 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 KLHL24Q6TFL4 600 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 IGFN1Q86VF2 1251 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 WDFY1Q8IWB7 410 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 LRRC75AQ8NAA5 344 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 OR4C15Q8NGM1 316 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 OR1K1Q8NGR3 316 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 GNPDA2Q8TDQ7 276 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 CCM2LQ9NUG4 571 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-212ENST00000590096 SIGLEC7Q9Y286 467 aa18.71■□□□□ 0.59
ATG4D-212ENST00000590096 FAM221AA4D161 298 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 KLF4O43474 513 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 IGHMP01871 453 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 PGA4P0DJD7 388 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 PGA3P0DJD8 388 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 ACADSP16219 412 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 FPR3P25089 353 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 RPL27P61353 136 aaKnown RBP18.7■□□□□ 0.58
ATG4D-212ENST00000590096 PPP1R8Q12972 351 aaKnown RBP18.7■□□□□ 0.58
ATG4D-212ENST00000590096 BEX5Q5H9J7 111 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 FAM205BPQ63HN1 556 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 C1orf94Q6P1W5 598 aa18.7■□□□□ 0.58
ATG4D-212ENST00000590096 PGBD2Q6P3X8 592 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms