RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 UPK3AO75631 287 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 IGHMP01871 453 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 CD79BP40259 229 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 DAP3P51398 398 aaKnown RBP16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ERVK-25P63136 954 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 RUNX1T1Q06455 604 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 OR6X1Q8NH79 312 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 LRRC46Q96FV0 321 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 SAMD8Q96LT4 415 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ADAD1Q96M93 576 aaKnown RBP16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 PSMG3-AS1Q96PY0 264 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 GPX7Q96SL4 187 aaPredicted RBP16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 NDEL1Q9GZM8 345 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 TXNIPQ9H3M7 391 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 UPB1Q9UBR1 384 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 CDH10Q9Y6N8 788 aa16.75■□□□□ 0.27
CLPTM1-209ENST00000588855 ZNF726A6NNF4 738 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 SOX14O95416 240 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 CNOT4O95628 575 aaKnown RBP16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 CD14P08571 375 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 GSTM3P21266 225 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 CCKARP32238 428 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 FOXG1P55316 489 aaPredicted RBP16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 RPL27P61353 136 aaKnown RBP16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 FAPQ12884 760 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 TAF11Q15544 211 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 RFX4Q33E94 735 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 PHYHD1Q5SRE7 291 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 ARMC4Q5T2S8 1044 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 KLHL17Q6TDP4 642 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 RASSF6Q6ZTQ3 369 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 ZNF771Q7L3S4 317 aaPredicted RBP16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 LINGO2Q7L985 606 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 CXorf67Q86X51 503 aaPredicted RBP16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 HIPK1Q86Z02 1210 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 POMGNT2Q8NAT1 580 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 ICA1LQ8NDH6 482 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 PLA2G12AQ9BZM1 189 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 LINC00470Q9BZP3 86 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 ELOVL5Q9NYP7 299 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 FOXD3Q9UJU5 478 aaPredicted RBP16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 ZNF346Q9UL40 294 aaKnown RBP16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 OAZ3Q9UMX2 235 aa16.74■□□□□ 0.27
CLPTM1-209ENST00000588855 SAC3D1A6NKF1 404 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 G3V2T6 193 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 TP53P04637 393 aaPredicted RBP16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 IGFBP1P08833 259 aaPredicted RBP16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 ANXA8P13928 327 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 IGHV1-2P23083 117 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 SNTB1Q13884 538 aaKnown RBP16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 CD300LDQ6UXZ3 194 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 STAC2Q6ZMT1 411 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 FAM122BQ7Z309 247 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 C20orf196Q8IYI0 205 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 SVOPLQ8N434 492 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 ATG16L2Q8NAA4 619 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 OR8D4Q8NGM9 314 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 ZNF519Q8TB69 540 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 SLC25A44Q96H78 314 aaPredicted RBP16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 Q96M85 177 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 GABARAPL1Q9H0R8 117 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 NRIP3Q9NQ35 241 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 ASB6Q9NWX5 421 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 KIF17Q9P2E2 1029 aa16.73■□□□□ 0.27
CLPTM1-209ENST00000588855 OR6C65A6NJZ3 312 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 M0R3G1 203 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 PDLIM1O00151 329 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 KRT33AO76009 404 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 PPP1R3DO95685 299 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 ITGA5P08648 1049 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 PGA4P0DJD7 388 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 PGA3P0DJD8 388 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 COX5AP20674 150 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 SLC6A6P31641 620 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 ACVR1BP36896 505 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 TSC22D1Q15714 1073 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 C9orf135Q5VTT2 229 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 FAHD1Q6P587 224 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 DPY19L2P2Q6ZN68 376 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 ZDHHC13Q8IUH4 622 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 PQLC1Q8N2U9 271 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 GPR137CQ8N3F9 429 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 CLDN22Q8N7P3 220 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 ZNF566Q969W8 418 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 ZNF556Q9HAH1 456 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 IL20Q9NYY1 176 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 REV1Q9UBZ9 1251 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 IER3IP1Q9Y5U9 82 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 BAHCC1Q9P281 2608 aa16.72■□□□□ 0.27
CLPTM1-209ENST00000588855 ANKHD1Q8IWZ3 2542 aaKnown RBP16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 TEX13CA0A0J9YWL9 993 aa16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 TRMUO75648 421 aaKnown RBP16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 LYZL6O75951 148 aa16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 IGHG1P01857 330 aa16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 ACADSP16219 412 aa16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 UGT2B10P36537 528 aa16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 CSNK1A1P48729 337 aa16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 DAPP51397 102 aa16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 ELF3P78545 371 aaPredicted RBP16.71■□□□□ 0.27
CLPTM1-209ENST00000588855 COX10Q12887 443 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms