RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 IFNA8P32881 189 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 CAPZA2P47755 286 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 GSK3BP49841 420 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 UGT2B15P54855 530 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 GNGT1P63211 74 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 C8orf82Q6P1X6 216 aaPredicted RBP17.81■□□□□ 0.44
SS18-224ENST00000584083 SLC35D2Q76EJ3 337 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 CIARTQ8N365 385 aaPredicted RBP17.81■□□□□ 0.44
SS18-224ENST00000584083 MUC15Q8N387 334 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 PFN4Q8NHR9 129 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 TMEM239Q8WW34 195 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 SGTBQ96EQ0 304 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 HS6ST2Q96MM7 605 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 SMR3AQ99954 134 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 ULBP2Q9BZM5 246 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 GRIP2Q9C0E4 1043 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 MOV10Q9HCE1 1003 aaKnown RBP17.81■□□□□ 0.44
SS18-224ENST00000584083 CBLN4Q9NTU7 201 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 MED31Q9Y3C7 131 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 ZNF469Q96JG9 3925 aaPredicted RBP17.81■□□□□ 0.44
SS18-224ENST00000584083 CRYAAP02489 173 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 ASAH2BP0C7U1 165 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 FUT1P19526 365 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 CSNK1A1P48729 337 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 PSME3P61289 254 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 ZNF544Q6NX49 715 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 SLC46A3Q7Z3Q1 461 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 VTCN1Q7Z7D3 282 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 WDFY1Q8IWB7 410 aa17.8■□□□□ 0.44
SS18-224ENST00000584083 ADAD1Q96M93 576 aaKnown RBP17.8■□□□□ 0.44
SS18-224ENST00000584083 KCTD14Q9BQ13 255 aaPredicted RBP17.8■□□□□ 0.44
SS18-224ENST00000584083 OR7A10O76100 309 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 IFNW1P05000 195 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 PRDX6P30041 224 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 YAP1P46937 504 aaKnown RBP17.79■□□□□ 0.44
SS18-224ENST00000584083 ST3GAL3Q11203 375 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 ETFDHQ16134 617 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 CLEC12BQ2HXU8 276 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 ZNF813Q6ZN06 617 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 FKBP9P1Q75LS8 142 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 CCDC36Q8IYA8 594 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 OR6X1Q8NH79 312 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 FAM162AQ96A26 154 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 COX4I2Q96KJ9 171 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 PRRC1Q96M27 445 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 KATNB1Q9BVA0 655 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 CACNG6Q9BXT2 260 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 C20orf141Q9NUB4 165 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 CRNNQ9UBG3 495 aaPredicted RBP17.79■□□□□ 0.44
SS18-224ENST00000584083 A4GNTQ9UNA3 340 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 VPS13CQ709C8 3753 aa17.79■□□□□ 0.44
SS18-224ENST00000584083 NDUFS7O75251 213 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 SERPINA1P01009 418 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 CECR9P0C854 216 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 CBR1P16152 277 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 APOBEC3AP31941 199 aaPredicted RBP17.78■□□□□ 0.44
SS18-224ENST00000584083 IDH3GP51553 393 aaPredicted RBP17.78■□□□□ 0.44
SS18-224ENST00000584083 MELKQ14680 651 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 C3orf36Q3SXR2 165 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 IFI44LQ53G44 452 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 CLEC9AQ6UXN8 241 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 FAM169BQ8N8A8 192 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 GEMIN6Q8WXD5 167 aaKnown RBP17.78■□□□□ 0.44
SS18-224ENST00000584083 ZNF566Q969W8 418 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 FNDC11Q9BVV2 318 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 ADA2Q9NZK5 511 aa17.78■□□□□ 0.44
SS18-224ENST00000584083 GDF2Q9UK05 429 aaPredicted RBP17.78■□□□□ 0.44
SS18-224ENST00000584083 A0A1W2PRG6 482 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 BCL10O95999 233 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 IGLV1-44P01699 117 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 IGHV4-39P01824 125 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 CD79AP11912 226 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 NCK1P16333 377 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 ARR3P36575 388 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 NAAAQ02083 359 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 CHRNB3Q05901 458 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 RPL18Q07020 188 aaKnown RBP17.77■□□□□ 0.44
SS18-224ENST00000584083 NPRL3Q12980 569 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 TNK1Q13470 666 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 C11orf71Q6IPW1 123 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 Q71RC1 249 aaPredicted RBP17.77■□□□□ 0.44
SS18-224ENST00000584083 CBLL1Q75N03 491 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 MDP1Q86V88 176 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 TMEM54Q969K7 222 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 SLC25A44Q96H78 314 aaPredicted RBP17.77■□□□□ 0.44
SS18-224ENST00000584083 BARX1Q9HBU1 254 aaPredicted RBP17.77■□□□□ 0.44
SS18-224ENST00000584083 SPAG4Q9NPE6 437 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 GLTPQ9NZD2 209 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 RHCGQ9UBD6 479 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 SNX13Q9Y5W8 968 aa17.77■□□□□ 0.44
SS18-224ENST00000584083 ZNF503-AS2A6NEH8 195 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 FAM171A2A8MVW0 826 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 PIP5K1CO60331 668 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 IGF2P01344 180 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 IGKV3-15P01624 115 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 HLA-HP01893 362 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 F13BP05160 661 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 CELA3BP08861 270 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 BMP4P12644 408 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 B4GALT1P15291 398 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms