RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 IFNA8P32881 189 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ARR3P36575 388 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 SLC7A2P52569 658 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ZNF133P52736 654 aaPredicted RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 SEC24CP53992 1094 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ARF1P84077 181 aaKnown RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 IL1RL1Q01638 556 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 LIPEQ05469 1076 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 SPOCK1Q08629 439 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ST3GAL3Q11203 375 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 PIN1Q13526 163 aaPredicted RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 HIST3H3Q16695 136 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ANKDD1AQ495B1 522 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 NRN1LQ496H8 165 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 LRRC23Q53EV4 343 aaPredicted RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 PHYHD1Q5SRE7 291 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 B3GLCTQ6Y288 498 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 SLC35D2Q76EJ3 337 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 HIST3H2AQ7L7L0 130 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 HDDC2Q7Z4H3 204 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 NKAIN4Q8IVV8 208 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 OFCC1Q8IZS5 231 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 FBXL14Q8N1E6 418 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 MUC15Q8N387 334 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 C10orf53Q8N6V4 93 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 OR4F15Q8NGB8 312 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 TMEM239Q8WW34 195 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 GEMIN6Q8WXD5 167 aaKnown RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 HIST1H2ACQ93077 130 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 TMEM54Q969K7 222 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 SLC25A44Q96H78 314 aaPredicted RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 TXNDC15Q96J42 360 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 PRRC1Q96M27 445 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 SEPHS2Q99611 448 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 MED29Q9NX70 200 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 B3GNT2Q9NY97 397 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 FBXO9Q9UK97 447 aaPredicted RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 POU2F3Q9UKI9 436 aa8.62□□□□□ -1.03
SKA2-208ENST00000583927 ANK3Q12955 4377 aaKnown RBP8.62□□□□□ -1.03
SKA2-208ENST00000583927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.62□□□□□ -1.036e-8■■■□□ 16
SKA2-208ENST00000583927 RNF13O43567 381 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 OR7A10O76100 309 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 CRYAAP02489 173 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 IFNW1P05000 195 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 CECR9P0C854 216 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 BMP4P12644 408 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 IFNGR1P15260 489 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 AHCYP23526 432 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 OR1E2P47887 323 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 CSNK1A1P48729 337 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 GSK3BP49841 420 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 NUDT2P50583 147 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 UGT2B15P54855 530 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 NAAAQ02083 359 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 CAMK2DQ13557 499 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 TAF11Q15544 211 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 FXNQ16595 210 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 DEF8Q6ZN54 512 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 PIWIL3Q7Z3Z3 882 aaKnown RBP8.61□□□□□ -1.03
SKA2-208ENST00000583927 PIGWQ7Z7B1 504 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 CPLX4Q7Z7G2 160 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 RNF113BQ8IZP6 322 aaKnown RBP8.61□□□□□ -1.03
SKA2-208ENST00000583927 LRRC17Q8N6Y2 441 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 FAM156AQ8NDB6 213 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 NUP37Q8NFH4 326 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 ZNF566Q969W8 418 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 ZNF75AQ96N20 296 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 EMC6Q9BV81 110 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 C1QTNF6Q9BXI9 259 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 MRPL13Q9BYD1 178 aaKnown RBP8.61□□□□□ -1.03
SKA2-208ENST00000583927 ULBP2Q9BZM5 246 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 ANKRD19PQ9H560 264 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 SPAG4Q9NPE6 437 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 GLTPQ9NZD2 209 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 STX18Q9P2W9 335 aaKnown RBP8.61□□□□□ -1.03
SKA2-208ENST00000583927 FBXL3Q9UKT7 428 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 MED31Q9Y3C7 131 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 SVEP1Q4LDE5 3571 aa8.61□□□□□ -1.03
SKA2-208ENST00000583927 SONP18583 2426 aaKnown RBP8.6□□□□□ -1.03
SKA2-208ENST00000583927 A0A096LPE4 126 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 A0A1W2PPZ6 126 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 C11orf98E9PRG8 122 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 H7C1Q1 480 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 M0R3G1 203 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 PRSS23O95084 383 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 IGHV4-39P01824 125 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 HEXAP06865 529 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 PGA4P0DJD7 388 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 PGA3P0DJD8 388 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 FUT1P19526 365 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 TNFRSF1BP20333 461 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 PTNP21246 168 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 CDKN1AP38936 164 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 FABP6P51161 128 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 BIDP55957 195 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 PSME3P61289 254 aa8.6□□□□□ -1.03
SKA2-208ENST00000583927 CHRNB3Q05901 458 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms