RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 KCNS3Q9BQ31 491 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 CBLN4Q9NTU7 201 aa17■□□□□ 0.31
SREBF1-220ENST00000581707 CRNNQ9UBG3 495 aaPredicted RBP17■□□□□ 0.31
SREBF1-220ENST00000581707 GMNCA6NCL1 334 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 CXCR6O00574 342 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 SNX3O60493 162 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 THRBP10828 461 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 UGT2B15P54855 530 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 BIDP55957 195 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 ETFDHQ16134 617 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 C3orf36Q3SXR2 165 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 SLC35D2Q76EJ3 337 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 SLC46A3Q7Z3Q1 461 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 CCDC36Q8IYA8 594 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 FAM169BQ8N8A8 192 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 TMEM255BQ8WV15 326 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 TMEM239Q8WW34 195 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 HS6ST2Q96MM7 605 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 KATNB1Q9BVA0 655 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 ZANQ9Y493 2812 aa16.99■□□□□ 0.31
SREBF1-220ENST00000581707 BLOC1S5-TXNDC5H3BN57 136 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 NDUFAB1O14561 156 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 SMAD7O15105 426 aaKnown RBP16.98■□□□□ 0.31
SREBF1-220ENST00000581707 SEC14L2O76054 403 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 IGLV1-44P01699 117 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 CRYAAP02489 173 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 CBR1P16152 277 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 FUT1P19526 365 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 APOBEC3AP31941 199 aaPredicted RBP16.98■□□□□ 0.31
SREBF1-220ENST00000581707 GSK3BP49841 420 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 CLEC12BQ2HXU8 276 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 C11orf71Q6IPW1 123 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 CLEC9AQ6UXN8 241 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 NANOGNBQ7Z5D8 188 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 VTCN1Q7Z7D3 282 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 OR6X1Q8NH79 312 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 PFN4Q8NHR9 129 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 SGTBQ96EQ0 304 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 ADAD1Q96M93 576 aaKnown RBP16.98■□□□□ 0.31
SREBF1-220ENST00000581707 CACNG6Q9BXT2 260 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 ULBP2Q9BZM5 246 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 POFUT2Q9Y2G5 429 aa16.98■□□□□ 0.31
SREBF1-220ENST00000581707 TLN2Q9Y4G6 2542 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 FAM171A2A8MVW0 826 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 NDUFS7O75251 213 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 OR7A10O76100 309 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 ZNF682O95780 498 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 IGF2P01344 180 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 IGKV3-15P01624 115 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 IGHV4-39P01824 125 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 CECR9P0C854 216 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 PRDX6P30041 224 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 IFNA8P32881 189 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 CAPZA2P47755 286 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 CSNK1A1P48729 337 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 GYS2P54840 703 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 PSME3P61289 254 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 NAAAQ02083 359 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 ST3GAL3Q11203 375 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 ZNF813Q6ZN06 617 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 BARX1Q9HBU1 254 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-220ENST00000581707 GDF2Q9UK05 429 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-220ENST00000581707 A4GNTQ9UNA3 340 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 MED31Q9Y3C7 131 aa16.97■□□□□ 0.31
SREBF1-220ENST00000581707 IFNW1P05000 195 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 ARR3P36575 388 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 ACVR1BP36896 505 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 GNGT1P63211 74 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 TNK1Q13470 666 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 ZNF627Q7L945 461 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 TMEM54Q969K7 222 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 ZNF566Q969W8 418 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 SLC25A44Q96H78 314 aaPredicted RBP16.96■□□□□ 0.31
SREBF1-220ENST00000581707 PRRC1Q96M27 445 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 KCTD14Q9BQ13 255 aaPredicted RBP16.96■□□□□ 0.31
SREBF1-220ENST00000581707 C20orf141Q9NUB4 165 aa16.96■□□□□ 0.31
SREBF1-220ENST00000581707 NSD1Q96L73 2696 aaPredicted RBP16.96■□□□□ 0.31
SREBF1-220ENST00000581707 CSPG4Q6UVK1 2322 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 ZNF503-AS2A6NEH8 195 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 LY6G6DO95868 133 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 BCL10O95999 233 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 CELA3BP08861 270 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 YAP1P46937 504 aaKnown RBP16.95■□□□□ 0.3
SREBF1-220ENST00000581707 IDH3GP51553 393 aaPredicted RBP16.95■□□□□ 0.3
SREBF1-220ENST00000581707 CHRNB3Q05901 458 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 RPL18Q07020 188 aaKnown RBP16.95■□□□□ 0.3
SREBF1-220ENST00000581707 MELKQ14680 651 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 Q71RC1 249 aaPredicted RBP16.95■□□□□ 0.3
SREBF1-220ENST00000581707 FKBP9P1Q75LS8 142 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 CBLL1Q75N03 491 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 MDP1Q86V88 176 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 LIPHQ8WWY8 451 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 GEMIN6Q8WXD5 167 aaKnown RBP16.95■□□□□ 0.3
SREBF1-220ENST00000581707 FOXB1Q99853 325 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 SEC61A2Q9H9S3 476 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 GLTPQ9NZD2 209 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 ABCD2Q9UBJ2 740 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 SNX13Q9Y5W8 968 aa16.95■□□□□ 0.3
SREBF1-220ENST00000581707 A0A1W2PRG6 482 aa16.94■□□□□ 0.3
SREBF1-220ENST00000581707 SERPINA1P01009 418 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms