RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 SLC7A10Q9NS82 523 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 IL20Q9NYY1 176 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 REV1Q9UBZ9 1251 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 MALT1Q9UDY8 824 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 FOXD3Q9UJU5 478 aaPredicted RBP13.34□□□□□ -0.27
MKS1-210ENST00000581180 ZNF346Q9UL40 294 aaKnown RBP13.34□□□□□ -0.27
MKS1-210ENST00000581180 KLF2Q9Y5W3 355 aaPredicted RBP13.34□□□□□ -0.27
MKS1-210ENST00000581180 CDH10Q9Y6N8 788 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 OR6C65A6NJZ3 312 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 G3V2T6 193 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 PDLIM1O00151 329 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 UPK3AO75631 287 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 IGHV3-9P01782 118 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 GRNP28799 593 aaKnown RBP13.33□□□□□ -0.28
MKS1-210ENST00000581180 DAPP51397 102 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 DAP3P51398 398 aaKnown RBP13.33□□□□□ -0.28
MKS1-210ENST00000581180 RPL27P61353 136 aaKnown RBP13.33□□□□□ -0.28
MKS1-210ENST00000581180 ERVK-25P63136 954 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 RUNX1T1Q06455 604 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 LGALS3BPQ08380 585 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 CAMK2DQ13557 499 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 RPL13AP3Q6NVV1 102 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 DPY19L2P2Q6ZN68 376 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 Q6ZT83 130 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 ZDHHC13Q8IUH4 622 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 C20orf196Q8IYI0 205 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 POMGNT2Q8NAT1 580 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 ICA1LQ8NDH6 482 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 OR8D4Q8NGM9 314 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 ZNF519Q8TB69 540 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 LRR1Q96L50 414 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 SAMD8Q96LT4 415 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 TSPAN32Q96QS1 320 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 KATNB1Q9BVA0 655 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 RBM24Q9BX46 236 aaKnown RBP13.33□□□□□ -0.28
MKS1-210ENST00000581180 POLDIP3Q9BY77 421 aaKnown RBP13.33□□□□□ -0.28
MKS1-210ENST00000581180 PLA2G12AQ9BZM1 189 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 EGLN3Q9H6Z9 239 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 NPDC1Q9NQX5 325 aaPredicted RBP13.33□□□□□ -0.28
MKS1-210ENST00000581180 GALNT8Q9NY28 637 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 ELOVL5Q9NYP7 299 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 IL20RAQ9UHF4 553 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 OAZ3Q9UMX2 235 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 ADAM18Q9Y3Q7 739 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 PTPN13Q12923 2485 aa13.33□□□□□ -0.28
MKS1-210ENST00000581180 ANKHD1Q8IWZ3 2542 aaKnown RBP13.33□□□□□ -0.28
MKS1-210ENST00000581180 COL12A1Q99715 3063 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 SAC3D1A6NKF1 404 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 ZNF726A6NNF4 738 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 CENPBD1B2RD01 187 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 C19orf84I3L1E1 186 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 SLC43A1O75387 559 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 CLDN1O95832 211 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 TXNDC12O95881 172 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 IGFBP1P08833 259 aaPredicted RBP13.32□□□□□ -0.28
MKS1-210ENST00000581180 PGA4P0DJD7 388 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 PGA3P0DJD8 388 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 APEHP13798 732 aaKnown RBP13.32□□□□□ -0.28
MKS1-210ENST00000581180 COX5AP20674 150 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 RPL4P36578 427 aaKnown RBP13.32□□□□□ -0.28
MKS1-210ENST00000581180 CD79BP40259 229 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 FOXG1P55316 489 aaPredicted RBP13.32□□□□□ -0.28
MKS1-210ENST00000581180 FAM27E3Q08E93 113 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 PHYHD1Q5SRE7 291 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 LINGO2Q7L985 606 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 ATG16L2Q8NAA4 619 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 TMEM54Q969K7 222 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 SLC25A44Q96H78 314 aaPredicted RBP13.32□□□□□ -0.28
MKS1-210ENST00000581180 MRPL13Q9BYD1 178 aaKnown RBP13.32□□□□□ -0.28
MKS1-210ENST00000581180 NDEL1Q9GZM8 345 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 SMURF2Q9HAU4 748 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 ADGRG4Q8IZF6 3080 aa13.32□□□□□ -0.28
MKS1-210ENST00000581180 HEATR1Q9H583 2144 aaKnown RBP13.31□□□□□ -0.28
MKS1-210ENST00000581180 RPL36A-HNRNPH2H7BZ11 118 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 ARPC3O15145 178 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 TRMUO75648 421 aaKnown RBP13.31□□□□□ -0.28
MKS1-210ENST00000581180 SOX14O95416 240 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 BAG2O95816 211 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 ACADSP16219 412 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 IGHV1-2P23083 117 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 SLC6A6P31641 620 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 PPP2R2BQ00005 443 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 FAPQ12884 760 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 TOP3AQ13472 1001 aaPredicted RBP13.31□□□□□ -0.28
MKS1-210ENST00000581180 P2RY6Q15077 328 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 RCN1Q15293 331 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 HIST3H3Q16695 136 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 CARD17Q5XLA6 110 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 FAM205BPQ63HN1 556 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 KDM4DQ6B0I6 523 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 GPR139Q6DWJ6 353 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 STAC2Q6ZMT1 411 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 HDDC2Q7Z4H3 204 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 UBE2J2Q8N2K1 259 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 ARIH2OSQ8N7S6 290 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 ACBD4Q8NC06 268 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 DNAJC9Q8WXX5 260 aa13.31□□□□□ -0.28
MKS1-210ENST00000581180 HDAC2Q92769 488 aaKnown RBP13.31□□□□□ -0.28
MKS1-210ENST00000581180 NMD3Q96D46 503 aaKnown RBP13.31□□□□□ -0.28
MKS1-210ENST00000581180 Q96M85 177 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms