RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 PTGS2P35354 604 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 CHN2P52757 468 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 BIDP55957 195 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 CLDN17P56750 224 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 RAP1BP61224 184 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 RAP1AP62834 184 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 TEKQ02763 1124 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 RUNX1T1Q06455 604 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 OCLNQ16625 522 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 SMN1Q16637 294 aaKnown RBP12.35□□□□□ -0.43
TSEN54-206ENST00000579449 SLC25A30Q5SVS4 291 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 FAM205BPQ63HN1 556 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 PLBD1Q6P4A8 553 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 RNF128Q8TEB7 428 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 ABHD3Q8WU67 409 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
TSEN54-206ENST00000579449 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 OTULINQ96BN8 352 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF582Q96NG8 517 aaPredicted RBP12.35□□□□□ -0.43
TSEN54-206ENST00000579449 NR1H4Q96RI1 486 aaPredicted RBP12.35□□□□□ -0.43
TSEN54-206ENST00000579449 SLX1AQ9BQ83 275 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 EMC6Q9BV81 110 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 ARHGAP21Q5T5U3 1957 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 SLC35F4A4IF30 521 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 OR6C68A6NDL8 312 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 AHRRA9YTQ3 701 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 KDM4EB2RXH2 506 aaPredicted RBP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 H7C1C5 153 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 SLC1A7O00341 560 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 TRMUO75648 421 aaKnown RBP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 SMNDC1O75940 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 RENP00797 406 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 PAICSP22234 425 aaKnown RBP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 NUDT6P53370 316 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 SLC16A1P53985 500 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 LCN6P62502 163 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 DBPQ10586 325 aaPredicted RBP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 AADACL4Q5VUY2 407 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 MEDAGQ5VYS4 303 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 ADGRE4PQ86SQ3 457 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 ADCK1Q86TW2 530 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 ZIC4Q8N9L1 334 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 BBS1Q8NFJ9 593 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 BPIFB6Q8NFQ5 453 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 OR9Q1Q8NGQ5 310 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 OR6X1Q8NH79 312 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF775Q96BV0 537 aaPredicted RBP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 WBP1Q96G27 269 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 Q96MT0 163 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF385AQ96PM9 386 aaKnown RBP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 SNX18Q96RF0 628 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 TRIB1Q96RU8 372 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 HCAR1Q9BXC0 346 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 YTHDF1Q9BYJ9 559 aaKnown RBP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 H2AFY2Q9P0M6 372 aaPredicted RBP12.34□□□□□ -0.43
TSEN54-206ENST00000579449 CLCF1Q9UBD9 225 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF175Q9Y473 711 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 FLVCR1Q9Y5Y0 555 aa12.34□□□□□ -0.43
TSEN54-206ENST00000579449 IGKV3D-15A0A087WSY6 115 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 PRSS37A4D1T9 235 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 SH3D21A4FU49 640 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 SLC22A20A6NK97 555 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 TTLL8A6PVC2 850 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 XPNPEP2O43895 674 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 TGM6O95932 706 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 RPSAP08865 295 aaKnown RBP12.33□□□□□ -0.44
TSEN54-206ENST00000579449 CLUP10909 449 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 CXCR4P61073 352 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 CAMK2DQ13557 499 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 RBM48Q5RL73 367 aaKnown RBP12.33□□□□□ -0.44
TSEN54-206ENST00000579449 NXNL2Q5VZ03 156 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 ZNF585AQ6P3V2 769 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 P4HA3Q7Z4N8 544 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 ZNF566Q969W8 418 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 ADAD1Q96M93 576 aaKnown RBP12.33□□□□□ -0.44
TSEN54-206ENST00000579449 DOCK7Q96N67 2140 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 KCNK17Q96T54 332 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 NMNAT2Q9BZQ4 307 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 OR51V1Q9H2C8 321 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 RPRD1BQ9NQG5 326 aaKnown RBP12.33□□□□□ -0.44
TSEN54-206ENST00000579449 VSX1Q9NZR4 365 aaPredicted RBP12.33□□□□□ -0.44
TSEN54-206ENST00000579449 KLHL9Q9P2J3 617 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 ING1Q9UK53 422 aaPredicted RBP12.33□□□□□ -0.44
TSEN54-206ENST00000579449 MYRFQ9Y2G1 1151 aa12.33□□□□□ -0.44
TSEN54-206ENST00000579449 SLC22A23A1A5C7 686 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 CCDC182A6NF36 153 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 PRODHO43272 600 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 FAM20BO75063 409 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 GYPBP06028 91 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 TPOP07202 933 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 CCDC159P0C7I6 412 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 ABOP16442 354 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 SLC2A5P22732 501 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 SLC25A1P53007 311 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 CDH11P55287 796 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 APOFQ13790 326 aa12.32□□□□□ -0.44
TSEN54-206ENST00000579449 RNPS1Q15287 305 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms