RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ABCD4O14678 606 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 FUT4P22083 530 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 PAX7P23759 505 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 MSX2P35548 267 aaPredicted RBP20.94■□□□□ 0.94
LIMD2-207ENST00000579329 ARF1P84077 181 aaKnown RBP20.94■□□□□ 0.94
LIMD2-207ENST00000579329 RPL18Q07020 188 aaKnown RBP20.94■□□□□ 0.94
LIMD2-207ENST00000579329 PHYHD1Q5SRE7 291 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 TSEN54Q7Z6J9 526 aaKnown RBP20.94■□□□□ 0.94
LIMD2-207ENST00000579329 FAM86B1Q8N7N1 296 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 OR6X1Q8NH79 312 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 BCAS4Q8TDM0 211 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 ACOT11Q8WXI4 607 aaPredicted RBP20.94■□□□□ 0.94
LIMD2-207ENST00000579329 BPIFA2Q96DR5 249 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 RADILQ96JH8 1075 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 C1QTNF6Q9BXI9 259 aa20.94■□□□□ 0.94
LIMD2-207ENST00000579329 MAP1AP78559 2803 aaPredicted RBP20.94■□□□□ 0.94
LIMD2-207ENST00000579329 ARPC4-TTLL3A0A0A6YYG9 625 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 HOXB1P14653 301 aaPredicted RBP20.93■□□□□ 0.94
LIMD2-207ENST00000579329 RHCEP18577 417 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 CD40P25942 277 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 CSNK1A1P48729 337 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 MELKQ14680 651 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 ZNF672Q499Z4 452 aaPredicted RBP20.93■□□□□ 0.94
LIMD2-207ENST00000579329 ZNF730Q6ZMV8 503 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 WDFY1Q8IWB7 410 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 NRMQ8IXM6 262 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 RNF113BQ8IZP6 322 aaKnown RBP20.93■□□□□ 0.94
LIMD2-207ENST00000579329 ARHGAP24Q8N264 748 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 LILRB1Q8NHL6 650 aaPredicted RBP20.93■□□□□ 0.94
LIMD2-207ENST00000579329 FBXW5Q969U6 566 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 PYURFQ96I23 114 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 C7orf34Q96L11 122 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 ULBP2Q9BZM5 246 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 NELFAQ9H3P2 528 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 NMNAT1Q9HAN9 279 aaPredicted RBP20.93■□□□□ 0.94
LIMD2-207ENST00000579329 NDUFAF4Q9P032 175 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 V9GYQ6 96 aa20.93■□□□□ 0.94
LIMD2-207ENST00000579329 HRNRQ86YZ3 2850 aaPredicted RBP20.93■□□□□ 0.94
LIMD2-207ENST00000579329 A0A087WUU8 490 aa20.92■□□□□ 0.94
LIMD2-207ENST00000579329 A0A1W2PRG6 482 aa20.92■□□□□ 0.94
LIMD2-207ENST00000579329 ZNF99A8MXY4 864 aaPredicted RBP20.92■□□□□ 0.94
LIMD2-207ENST00000579329 BCL10O95999 233 aa20.92■□□□□ 0.94
LIMD2-207ENST00000579329 H1F0P07305 194 aaKnown RBP20.92■□□□□ 0.94
LIMD2-207ENST00000579329 TSPAN19P0C672 248 aa20.92■□□□□ 0.94
LIMD2-207ENST00000579329 AQP2P41181 271 aa20.92■□□□□ 0.94
LIMD2-207ENST00000579329 LSM11P83369 360 aaKnown RBP eCLIP20.92■□□□□ 0.94
LIMD2-207ENST00000579329 PRKCDQ05655 676 aa20.92■□□□□ 0.94
LIMD2-207ENST00000579329 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
LIMD2-207ENST00000579329 ZNF566Q969W8 418 aa20.92■□□□□ 0.94
LIMD2-207ENST00000579329 ZNF837Q96EG3 531 aaPredicted RBP20.92■□□□□ 0.94
LIMD2-207ENST00000579329 INIPQ9NRY2 104 aa20.92■□□□□ 0.94
LIMD2-207ENST00000579329 A0A096LPE4 126 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 A0A1W2PPZ6 126 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 SHISA9B4DS77 424 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 hCG_2039718K7EN88 272 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 F13BP05160 661 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 T-ENOLP0DO92 83 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 SAGP10523 405 aaPredicted RBP20.91■□□□□ 0.94
LIMD2-207ENST00000579329 ITGA2P17301 1181 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 DAP3P51398 398 aaKnown RBP20.91■□□□□ 0.94
LIMD2-207ENST00000579329 CDH11P55287 796 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 VLDLRP98155 873 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 MBOAT2Q6ZWT7 520 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 RRM2BQ7LG56 351 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 HDDC2Q7Z4H3 204 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 CDK20Q8IZL9 346 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 MOSPD2Q8NHP6 518 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 NEUROG1Q92886 237 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 TMEM54Q969K7 222 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 SLC25A44Q96H78 314 aaPredicted RBP20.91■□□□□ 0.94
LIMD2-207ENST00000579329 MOV10Q9HCE1 1003 aaKnown RBP20.91■□□□□ 0.94
LIMD2-207ENST00000579329 POFUT2Q9Y2G5 429 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 HIF3AQ9Y2N7 669 aa20.91■□□□□ 0.94
LIMD2-207ENST00000579329 ACANP16112 2415 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 A0A1W2PRQ8 180 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 EFCAB9A8MZ26 197 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 MCIDASD6RGH6 385 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 SMPD2O60906 423 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 TMCC2O75069 709 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 SEMG1P04279 462 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 MAKP20794 623 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 DGCR6Q14129 220 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 SLC22A25Q6T423 547 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 RINLQ6ZS11 566 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 DEPDC4Q8N2C3 294 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 TMEM171Q8WVE6 324 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 MCUR1Q96AQ8 359 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 GLTPQ9NZD2 209 aa20.9■□□□□ 0.94
LIMD2-207ENST00000579329 PRRC2AP48634 2157 aaKnown RBP20.9■□□□□ 0.94
LIMD2-207ENST00000579329 IGHG1P01857 330 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 SLC9A3P48764 834 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 RPS4XP62701 263 aaKnown RBP20.89■□□□□ 0.93
LIMD2-207ENST00000579329 TUBA1BP68363 451 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 TUBA4AP68366 448 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 SPOCK1Q08629 439 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 ANKDD1AQ495B1 522 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 ALG10Q5BKT4 473 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 FGD3Q5JSP0 725 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 TUBA1AQ71U36 451 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 TRPM8Q7Z2W7 1104 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms