RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 ZNF443Q9Y2A4 671 aaPredicted RBP3.32□□□□□ -1.88
NUP85-209ENST00000578987 ARL2BPQ9Y2Y0 163 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 NDUFAF1Q9Y375 327 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 FKBP7Q9Y680 259 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 GMEB1Q9Y692 573 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 TANC2Q9HCD6 1990 aa3.32□□□□□ -1.88
NUP85-209ENST00000578987 MXRA5Q9NR99 2828 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ATRQ13535 2644 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ARPC4-TTLL3A0A0A6YYG9 625 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 IGHV2OR16-5A0A0B4J2B6 119 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 A0A0G2JPF8 293 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 LOC100653049A0A140TA62 436 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 BBIP1A8MTZ0 92 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HNRNPCL2B2RXH8 293 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HNRNPCL3B7ZW38 293 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 FAM157AC9JC47 383 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 FTCDNL1E5RQL4 147 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 LRRN3E7EW58 273 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 C11orf98E9PRG8 122 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 M0R082 166 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 NDUFS8O00217 210 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CLIC1O00299 241 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 FAAHO00519 579 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 RFXANKO14593 260 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 TCF21O43680 179 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 TPST1O60507 370 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HNRNPCL1O60812 293 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 NPIPB7O75200 414 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 SLC43A1O75387 559 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 SERPINI2O75830 405 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 DCTN3O75935 186 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 KRT34O76011 436 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 AHSA1O95433 338 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 KRT75O95678 551 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HPRP00739 348 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 IGLV1-44P01699 117 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HLA-HP01893 362 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HPXP02790 462 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 TACSTD2P09758 323 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CSF3P09919 207 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HNRNPCL4P0DMR1 293 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 NAT2P11245 290 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CCL2P13500 99 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CBR1P16152 277 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZNF43P17038 809 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 RHCEP18577 417 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 NPR2P20594 1047 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HNF1AP20823 631 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 GIFP27352 417 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 PRDX6P30041 224 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 GRPRP30550 384 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ALDH3B1P43353 468 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ANXA11P50995 505 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 MNAT1P51948 309 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CHN2P52757 468 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 DSTNP60981 165 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 COPZ1P61923 177 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 RUNX1T1Q06455 604 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 KLF10Q13118 480 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 HNRNPA0Q13151 305 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 SNTB2Q13425 540 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 CAMK2DQ13557 499 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 RIN1Q13671 783 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 C1DQ13901 141 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 CYLC2Q14093 348 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 DAG1Q14118 895 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 GNA13Q14344 377 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 RAB39AQ14964 217 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 MAD2L1BPQ15013 274 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 LARS2Q15031 903 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 MAPRE2Q15555 327 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 EFNB3Q15768 340 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZSWIM7Q19AV6 140 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 LIN52Q52LA3 116 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 AGKQ53H12 422 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 COQ5Q5HYK3 327 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ELFN2Q5R3F8 820 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 LRIF1Q5T3J3 769 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 INTS11Q5TA45 600 aaKnown RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 LIPNQ5VXI9 398 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 SLC2A7Q6PXP3 512 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 C12orf54Q6X4T0 127 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 DEF8Q6ZN54 512 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 C1orf122Q6ZSJ8 110 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZNF771Q7L3S4 317 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZNF440Q8IYI8 595 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 C10orf111Q8N326 155 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZNF786Q8N393 782 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 DPP10Q8N608 796 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.31□□□□□ -1.88
NUP85-209ENST00000578987 LINC01356Q8N9X3 169 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CCDC197Q8NCU1 140 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZNF540Q8NDQ6 660 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 OR4F15Q8NGB8 312 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 OR9I1Q8NGQ6 314 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 CLDND2Q8NHS1 167 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 MFSD8Q8NHS3 518 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 NFKBIDQ8NI38 313 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 ZNF417Q8TAU3 575 aa3.31□□□□□ -1.88
NUP85-209ENST00000578987 BCAS4Q8TDM0 211 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms