RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 NXNL2Q5VZ03 156 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 XAF1Q6GPH4 301 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 IL20RBQ6UXL0 311 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 LIX1LQ8IVB5 337 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 OR10G3Q8NGC4 313 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 OR9Q1Q8NGQ5 310 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 STK35Q8TDR2 534 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 RAB2BQ8WUD1 216 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 LIPHQ8WWY8 451 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 TMIGD2Q96BF3 282 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 DDIT4LQ96D03 193 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 RNFT2Q96EX2 444 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 SGCZQ96LD1 299 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 ERMAPQ96PL5 475 aaPredicted RBP9.12□□□□□ -0.95
SS18-210ENST00000578700 TSC22D3Q99576 134 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 TTYH2Q9BSA4 534 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 MND1Q9BWT6 205 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 ASPNQ9BXN1 380 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 YIPF3Q9GZM5 350 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 RACGAP1Q9H0H5 632 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 EXO5Q9H790 373 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 FKRPQ9H9S5 495 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 ACOT13Q9NPJ3 140 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 TIMMDC1Q9NPL8 285 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 CMC2Q9NRP2 79 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 EDARQ9UNE0 448 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 RPH3AQ9Y2J0 694 aaPredicted RBP9.12□□□□□ -0.95
SS18-210ENST00000578700 GPR52Q9Y2T5 361 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 CEPT1Q9Y6K0 416 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 COMMD3-BMI1R4GMX3 469 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 EML6Q6ZMW3 1958 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 MPDZO75970 2070 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 ZANQ9Y493 2812 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 A0A087WZY1 265 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 IGLV3-32A0A0A0MS00 114 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 A0A0G2JNJ9 132 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 SLC22A31A6NKX4 558 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 BLOC1S5-TXNDC5H3BN57 136 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 ACOT7O00154 380 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 SNX4O95219 450 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 PPP1R3DO95685 299 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 P04436 131 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 GLI4P10075 376 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 PRKCAP17252 672 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 PCMT1P22061 227 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 DCKP27707 260 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 HTR1FP30939 366 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 UQCRC1P31930 480 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 EIF1P41567 113 aaKnown RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 MAP2K4P45985 399 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 RPS5P46782 204 aaKnown RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 RPS7P62081 194 aaKnown RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 EFNB1P98172 346 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.11□□□□□ -0.95
SS18-210ENST00000578700 ALG10Q5BKT4 473 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 SLC35F1Q5T1Q4 408 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 FAM69AQ5T7M9 428 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 SYT6Q5T7P8 510 aaPredicted RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 LCN1P1Q5VSP4 162 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 C1orf140Q5VVS0 124 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 UBE2UQ5VVX9 321 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 FOXB2Q5VYV0 432 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 SLC22A10Q63ZE4 541 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 OR5M10Q6IEU7 315 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 TMEM81Q6P7N7 255 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 ZNF367Q7RTV3 350 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 JAZF1Q86VZ6 243 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 CDC20BQ86Y33 519 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 CPOQ8IVL8 374 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 ALDH16A1Q8IZ83 802 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 ARMC10Q8N2F6 343 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 ZFP62Q8NB50 900 aaPredicted RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 OR6S1Q8NH40 331 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 SGCDQ92629 289 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 ISOC1Q96CN7 298 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 NMD3Q96D46 503 aaKnown RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 MRGPRX4Q96LA9 322 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 MYCBPQ99417 103 aaPredicted RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 BCL7BQ9BQE9 202 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 RHNO1Q9BSD3 238 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 TAPBPLQ9BX59 468 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 RTN4RQ9BZR6 473 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 RBM38Q9H0Z9 239 aaKnown RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 LDAHQ9H6V9 325 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 GALNT9Q9HCQ5 603 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 SACM1LQ9NTJ5 587 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 DEPPQ9NTK1 212 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 PTTG2Q9NZH5 202 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 MED11Q9P086 117 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 Q9UFV3 132 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 DIMT1Q9UNQ2 313 aaKnown RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 EXOSC1Q9Y3B2 195 aaKnown RBP9.11□□□□□ -0.95
SS18-210ENST00000578700 LIPGQ9Y5X9 500 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 ARHGAP21Q5T5U3 1957 aa9.11□□□□□ -0.95
SS18-210ENST00000578700 IGKV1D-42A0A075B6H8 117 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 C2orf72A6NCS6 295 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 FIGNL2A6NMB9 653 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 IMPA2O14732 288 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 ARPC3O15145 178 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms