RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CCDC74AQ96AQ1 378 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 LCORQ96JN0 433 aaPredicted RBP8.12□□□□□ -1.11
NCBP3-204ENST00000574911 SLC38A3Q99624 504 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 ZNF436Q9C0F3 470 aaPredicted RBP8.12□□□□□ -1.11
NCBP3-204ENST00000574911 CHRNA10Q9GZZ6 450 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 WDR76Q9H967 626 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 FKRPQ9H9S5 495 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 PNO1Q9NRX1 252 aaKnown RBP8.12□□□□□ -1.11
NCBP3-204ENST00000574911 LAMP5Q9UJQ1 280 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 FBXL3Q9UKT7 428 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 MMACHCQ9Y4U1 282 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 UNC80Q8N2C7 3258 aa8.12□□□□□ -1.11
NCBP3-204ENST00000574911 A0A1B0GTH9 108 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 LINC00862A6NCI5 91 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 LEUTXA8MZ59 168 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 G3V3Q6 166 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 H7C1C5 153 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 KHDRBS3O75525 346 aaKnown RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 SLC22A5O76082 557 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 TPPPO94811 219 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 ZNF432O94892 652 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 LDOC1O95751 146 aaPredicted RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 RENP00797 406 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 IGKV3-11P04433 115 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 ALOX5APP20292 161 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 CSRP1P21291 193 aaKnown RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 CDK2P24941 298 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 SLC6A8P48029 635 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 SOX2P48431 317 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 ART1P52961 327 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 LCN6P62502 163 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 ELOCQ15369 112 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 TMEM69Q5SWH9 247 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 GPR139Q6DWJ6 353 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 Q6ZTK2 550 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 TMEM151BQ8IW70 566 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 ZNF680Q8NEM1 530 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 OR2G2Q8NGZ5 317 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 ZNF563Q8TA94 476 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 NSMAFQ92636 917 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 CLIP3Q96DZ5 547 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 KLHL15Q96M94 604 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 CITED4Q96RK1 184 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 RTN4RQ9BZR6 473 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 OR10A4Q9H209 315 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 BEX1Q9HBH7 125 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 PDE7BQ9NP56 450 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 NPDC1Q9NQX5 325 aaPredicted RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 SOHLH2Q9NX45 425 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 NKIRAS2Q9NYR9 191 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 KLK11Q9UBX7 282 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 A0A1B0GUH1 482 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 A8MUA0 341 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 ZNF254O75437 659 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 DDAH2O95865 285 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 BGLAPP02818 100 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 GLULP15104 373 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 DNASE1P24855 282 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 MAOBP27338 520 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 SELENOPP49908 381 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 TAS2R20P59543 309 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 METTL11BQ5VVY1 283 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 LRRN1Q6UXK5 716 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 C17orf82Q86X59 251 aaPredicted RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 PRSS35Q8N3Z0 413 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 C1orf216Q8TAB5 229 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 ZNF721Q8TF20 911 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 C15orf40Q8WUR7 153 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 DACT3Q96B18 629 aaPredicted RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 NXPE2Q96DL1 559 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 TGM7Q96PF1 710 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 UTP23Q9BRU9 249 aaKnown RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 MRTO4Q9UKD2 239 aaKnown RBP8.11□□□□□ -1.11
NCBP3-204ENST00000574911 AUP1Q9Y679 476 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 FKBP7Q9Y680 259 aa8.11□□□□□ -1.11
NCBP3-204ENST00000574911 TRAV8-7A0A075B6U6 113 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 IGKV3D-11A0A0A0MRZ8 115 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 TLCD2A6NGC4 264 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 HSPB2A8KAH6 182 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 C2CD4DB7Z1M9 353 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 H3BMH7 237 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 ACOT7O00154 380 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 ICOSLGO75144 302 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 HIST1H2ABP04908 130 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
NCBP3-204ENST00000574911 LCN1P31025 176 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 VEGFCP49767 419 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 SCAND1P57086 179 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 ZNF117Q03924 483 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 HSPB2Q16082 182 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 ESCO2Q56NI9 601 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 HIST3H2AQ7L7L0 130 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 GKN2Q86XP6 184 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 SMRP1Q8NCR6 262 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 DNAAF1Q8NEP3 725 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 OR6N2Q8NGY6 317 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 LMX1AQ8TE12 382 aa8.1□□□□□ -1.11
NCBP3-204ENST00000574911 HIST1H2ACQ93077 130 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms