RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TXNIPQ9H3M7 391 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 SAMHD1Q9Y3Z3 626 aaKnown RBP11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 LYVE1Q9Y5Y7 322 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 CENPEQ02224 2701 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 UNC119BA6NIH7 251 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 A6NNC1 897 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 RPL36A-HNRNPH2H7BZ11 118 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 M0R3G1 203 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 PDLIM1O00151 329 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 CDC42EP2O14613 210 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 ENTPD5O75356 428 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 UPK3AO75631 287 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 CCNB2O95067 398 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 NDUFB2O95178 105 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 ITGA5P08648 1049 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 FUT4P22083 530 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 CRYGSP22914 178 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 PAX7P23759 505 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 RPL4P36578 427 aaKnown RBP11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 OMPP47874 163 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 ARHGDIAP52565 204 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 CLRN1P58418 232 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 CTXN1P60606 82 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 ROR2Q01974 943 aaKnown RBP11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 SEC23BQ15437 767 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 TSC22D1Q15714 1073 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 FAM205BPQ63HN1 556 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 TMEM200AQ86VY9 491 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 WFDC8Q8IUA0 241 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 C20orf196Q8IYI0 205 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 C10orf67Q8IYJ2 551 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 TMEM123Q8N131 208 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR13C2Q8NGS9 318 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 MOSPD2Q8NHP6 518 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 GNPDA2Q8TDQ7 276 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 MUS81Q96NY9 551 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 TNFRSF13CQ96RJ3 184 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 ULBP2Q9BZM5 246 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 CCM2LQ9NUG4 571 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 MAGED1Q9Y5V3 778 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 CRYBG3Q68DQ2 2970 aa11.24□□□□□ -0.61
TRAPPC1-206ENST00000573989 NBPF19A0A087WUL8 3843 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR5H1A6NKK0 313 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 WNT11O96014 354 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 HOXB1P14653 301 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 CDH2P19022 906 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 FPR3P25089 353 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 LIMS1P48059 325 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 NR1H2P55055 460 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 RPL27P61353 136 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 MELKQ14680 651 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 PPA1Q15181 289 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 TAB1Q15750 504 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 GABRA6Q16445 453 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 ACKR1Q16570 336 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 BEX5Q5H9J7 111 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 C9orf135Q5VTT2 229 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 RPL13AP3Q6NVV1 102 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 C1orf94Q6P1W5 598 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 NHLRC1Q6VVB1 395 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 YTHDF3Q7Z739 585 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZER1Q7Z7L7 766 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 MEX3DQ86XN8 651 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZNF295-AS1Q8N0V1 137 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 FNDC8Q8TC99 324 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 ASB10Q8WXI3 467 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 RAB3IPQ96QF0 476 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 POLDIP3Q9BY77 421 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 GPR35Q9HC97 309 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 MOV10Q9HCE1 1003 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 OBP2BQ9NPH6 170 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 GLTPQ9NZD2 209 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 GRHPRQ9UBQ7 328 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 SIGLEC7Q9Y286 467 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 POFUT2Q9Y2G5 429 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 AMDHD2Q9Y303 409 aa11.23□□□□□ -0.61
TRAPPC1-206ENST00000573989 A6NIZ1 184 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZNF99A8MXY4 864 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 XKRYO14609 159 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 FKBP6O75344 327 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 DEAF1O75398 565 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 E2F6O75461 281 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 CTAG2O75638 210 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 IGHMP01871 453 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 CD14P08571 375 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 PGA4P0DJD7 388 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 PGA3P0DJD8 388 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 ACADSP16219 412 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 UBE2NP61088 152 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 RAP1BP61224 184 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 RAP1AP62834 184 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 TSPAN31Q12999 210 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 TOP3AQ13472 1001 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 MICAQ29983 383 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 CEACAM16Q2WEN9 425 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 ALKBH2Q6NS38 261 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 ANKRD16Q6P6B7 361 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms