RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 RBMS2Q15434 407 aaKnown RBP14.23□□□□□ -0.13
NUP88-207ENST00000573584 ODF4Q2M2E3 257 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 ALG10Q5BKT4 473 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 ALKAL2Q6UX46 152 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 DNM1P46Q6ZS02 220 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 HIST3H2AQ7L7L0 130 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 FAM122BQ7Z309 247 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 ZNF761Q86XN6 746 aaPredicted RBP14.23□□□□□ -0.13
NUP88-207ENST00000573584 OR5M1Q8NGP8 315 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 COQ8AQ8NI60 647 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 HIST1H2ACQ93077 130 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 LINC00052Q96N35 136 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 FAM60AQ9NP50 221 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 ARHGEF17Q96PE2 2063 aaPredicted RBP14.23□□□□□ -0.13
NUP88-207ENST00000573584 A0A0A6YYC8 382 aaPredicted RBP14.23□□□□□ -0.13
NUP88-207ENST00000573584 OR2W5A6NFC9 320 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 H0YC42 278 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 H7C417 338 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 I3L1I5 382 aaPredicted RBP14.23□□□□□ -0.13
NUP88-207ENST00000573584 DCTN6O00399 190 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 F13BP05160 661 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 HOXD4P09016 255 aaPredicted RBP14.23□□□□□ -0.13
NUP88-207ENST00000573584 ZP3P21754 424 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 BAMBIQ13145 260 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 CSRP2Q16527 193 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 RGS7BPQ6MZT1 257 aaPredicted RBP14.23□□□□□ -0.13
NUP88-207ENST00000573584 PARM1Q6UWI2 310 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 ZNF676Q8N7Q3 588 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 FGF14Q92915 247 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 TMEM106AQ96A25 262 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 PNPLA2Q96AD5 504 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 CXorf58Q96LI9 332 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 MOGAT1Q96PD6 335 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 CERS4Q9HA82 394 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 MTFP1Q9UDX5 166 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 LAMP5Q9UJQ1 280 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 HIF3AQ9Y2N7 669 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 TNFRSF10CO14798 259 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 TSPAN4O14817 238 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 PRAMEF2O60811 474 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 ABHD16AO95870 558 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 NMBP08949 121 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 SDHAP31040 664 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 H2BFSP57053 126 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 ERV3-1Q14264 604 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 ZNF74Q16587 644 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 SLC36A1Q7Z2H8 476 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 ZNF227Q86WZ6 799 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 EXD3Q8N9H8 876 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 OR4C16Q8NGL9 310 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 GABRG3Q99928 467 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 OPN4Q9UHM6 478 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 POM121CA8CG34 1229 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 H7C1C5 153 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 RP2O75695 350 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 LCN6P62502 163 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 C2orf68Q2NKX9 166 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 TUSC1Q2TAM9 212 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 TMUB2Q71RG4 321 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 OR51A4Q8NGJ6 313 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 OR10AC1Q8NH08 325 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 C16orf52Q8NHV5 167 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 GRHPRQ9UBQ7 328 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 STEAP1Q9UHE8 339 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 SESN1Q9Y6P5 492 aa14.22□□□□□ -0.13
NUP88-207ENST00000573584 FXYD6-FXYD2A0A087WZ82 144 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 OR4C45A6NMZ5 311 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 PRKNO60260 465 aaPredicted RBP14.21□□□□□ -0.13
NUP88-207ENST00000573584 TPPPO94811 219 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 ATF4P18848 351 aaPredicted RBP14.21□□□□□ -0.13
NUP88-207ENST00000573584 HNRNPA2B1P22626 353 aaKnown RBP14.21□□□□□ -0.13
NUP88-207ENST00000573584 RPS27P42677 84 aaKnown RBP14.21□□□□□ -0.13
NUP88-207ENST00000573584 CCR4P51679 360 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 CDC20BQ86Y33 519 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 ZNF595Q8IYB9 648 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 SDR16C5Q8N3Y7 309 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 OR4D10Q8NGI6 311 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 OR2G2Q8NGZ5 317 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 ZNF417Q8TAU3 575 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 ULBP3Q9BZM4 244 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 COMMD4Q9H0A8 199 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 ARL6Q9H0F7 186 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 FXYD6Q9H0Q3 95 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 ERVK-19Q9WJR5 959 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 SPTBP11277 2137 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 HEATR5AQ86XA9 2040 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 HMSDA8MTL9 139 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 PROS1P07225 676 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 NUP62P37198 522 aaPredicted RBP14.21□□□□□ -0.13
NUP88-207ENST00000573584 ADH7P40394 386 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 UBE2MP61081 183 aaKnown RBP14.21□□□□□ -0.13
NUP88-207ENST00000573584 TMEM31Q5JXX7 168 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 OOSP2Q86WS3 158 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 LRRC75AQ8NAA5 344 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 OR51D1Q8NGF3 324 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 OR6N2Q8NGY6 317 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 GPR148Q8TDV2 347 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 KLHL15Q96M94 604 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 DGAT2Q96PD7 388 aa14.21□□□□□ -0.13
NUP88-207ENST00000573584 IGFLR1Q9H665 355 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms