RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 MT-ND1P03886 318 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 SOD3P08294 240 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 PGA4P0DJD7 388 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 PGA3P0DJD8 388 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 THRBP10828 461 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 MAKP20794 623 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 HOXC12P31275 282 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 LIMS1P48059 325 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 ZNF133P52736 654 aaPredicted RBP7.58□□□□□ -1.2
SMG6-210ENST00000572205 ART1P52961 327 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 ACKR1Q16570 336 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 HIST3H3Q16695 136 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 DEFB113Q30KQ7 82 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 TBRG1Q3YBR2 411 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 C11orf71Q6IPW1 123 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 NIPAL3Q6P499 406 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 AAED1Q7RTV5 226 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 PXKQ7Z7A4 578 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 CPLX4Q7Z7G2 160 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 P2RY8Q86VZ1 359 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 C20orf196Q8IYI0 205 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 POMGNT2Q8NAT1 580 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 PIK3C3Q8NEB9 887 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 OR52N5Q8NH56 324 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 MAGEE2Q8TD90 523 aaPredicted RBP7.58□□□□□ -1.2
SMG6-210ENST00000572205 TMEM239Q8WW34 195 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 GEMIN6Q8WXD5 167 aaKnown RBP7.58□□□□□ -1.2
SMG6-210ENST00000572205 PROX1Q92786 737 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 EPYCQ99645 322 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 EMC6Q9BV81 110 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 MRPL13Q9BYD1 178 aaKnown RBP7.58□□□□□ -1.2
SMG6-210ENST00000572205 GORASP2Q9H8Y8 452 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 GPR35Q9HC97 309 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 DCAF13Q9NV06 445 aaKnown RBP7.58□□□□□ -1.2
SMG6-210ENST00000572205 NDUFAF4Q9P032 175 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 TAGLN3Q9UI15 199 aa7.58□□□□□ -1.2
SMG6-210ENST00000572205 A0A087WUU8 490 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 IGKV1D-43A0A0B4J1Z2 117 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 IGHV1-18A0A0C4DH31 117 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 TCRBV5S2A0A599 114 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 SLC35F4A4IF30 521 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 NPIPB13A6NJU9 1138 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 NPIPB4C9JG80 1138 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ARPC2O15144 300 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 DCTN3O75935 186 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 OR7A10O76100 309 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ZNF682O95780 498 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 CH25HO95992 272 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 IGKV3-15P01624 115 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 IGHMP01871 453 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 MSX2P35548 267 aaPredicted RBP7.57□□□□□ -1.2
SMG6-210ENST00000572205 NR1H2P55055 460 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ADAM8P78325 824 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ROR2Q01974 943 aaKnown RBP7.57□□□□□ -1.2
SMG6-210ENST00000572205 RPL18Q07020 188 aaKnown RBP7.57□□□□□ -1.2
SMG6-210ENST00000572205 MELKQ14680 651 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 MFSD13AQ14CX5 517 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 SEC23BQ15437 767 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 STK11Q15831 433 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ZNF672Q499Z4 452 aaPredicted RBP7.57□□□□□ -1.2
SMG6-210ENST00000572205 IFI44LQ53G44 452 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ARMC4Q5T2S8 1044 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 TMEM225Q6GV28 225 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 C20orf204Q6ZNR8 217 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 DNM1P46Q6ZS02 220 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 DTX2Q86UW9 622 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 MEX3DQ86XN8 651 aaKnown RBP7.57□□□□□ -1.2
SMG6-210ENST00000572205 ZNF611Q8N823 705 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 WFDC11Q8NEX6 87 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 MOSPD2Q8NHP6 518 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 SLC7A13Q8TCU3 470 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ASB10Q8WXI3 467 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 TMEM54Q969K7 222 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 TPD52L3Q96J77 140 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 LRRC37BQ96QE4 947 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 PIP5K1AQ99755 562 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 GPA33Q99795 319 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 KCTD14Q9BQ13 255 aaPredicted RBP7.57□□□□□ -1.2
SMG6-210ENST00000572205 UBTD1Q9HAC8 227 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ZNF701Q9NV72 531 aaPredicted RBP7.57□□□□□ -1.2
SMG6-210ENST00000572205 PARPBPQ9NWS1 579 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 B3GNT2Q9NY97 397 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 RHCGQ9UBD6 479 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 SLC13A4Q9UKG4 626 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ADAM21Q9UKJ8 722 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 RNF115Q9Y4L5 304 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 NOX1Q9Y5S8 564 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 ENPP4Q9Y6X5 453 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 RTTNQ86VV8 2226 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 TANC2Q9HCD6 1990 aa7.57□□□□□ -1.2
SMG6-210ENST00000572205 TRBV4-1A0A0J9YWV2 114 aa7.56□□□□□ -1.2
SMG6-210ENST00000572205 E7EQL1 145 aa7.56□□□□□ -1.2
SMG6-210ENST00000572205 ABCD4O14678 606 aa7.56□□□□□ -1.2
SMG6-210ENST00000572205 SEC14L2O76054 403 aa7.56□□□□□ -1.2
SMG6-210ENST00000572205 IFNW1P05000 195 aa7.56□□□□□ -1.2
SMG6-210ENST00000572205 IGFBP1P08833 259 aaPredicted RBP7.56□□□□□ -1.2
SMG6-210ENST00000572205 CELA3BP08861 270 aa7.56□□□□□ -1.2
SMG6-210ENST00000572205 IFNGR1P15260 489 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms