RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	GPA33	Q99795	319 aa		10.2	□□□□□ -0.78
ATP2A3-208	ENST00000570845	HDHD5	Q9BXW7	423 aa		10.2	□□□□□ -0.78
ATP2A3-208	ENST00000570845	LINC00470	Q9BZP3	86 aa		10.2	□□□□□ -0.78
ATP2A3-208	ENST00000570845	NDEL1	Q9GZM8	345 aa		10.2	□□□□□ -0.78
ATP2A3-208	ENST00000570845	SLC24A3	Q9HC58	644 aa		10.2	□□□□□ -0.78
ATP2A3-208	ENST00000570845	MCCC2	Q9HCC0	563 aa		10.2	□□□□□ -0.78
ATP2A3-208	ENST00000570845	DNAJB9	Q9UBS3	223 aa		10.2	□□□□□ -0.78
ATP2A3-208	ENST00000570845	NDRG3	Q9UGV2	375 aa		10.2	□□□□□ -0.78
ATP2A3-208	ENST00000570845	APC	P25054	2843 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	CIB4	A0PJX0	185 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	KLF4	O43474	513 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	DEAF1	O75398	565 aa	Predicted RBP	10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	E2F6	O75461	281 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	RAD51D	O75771	328 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	BCL10	O95999	233 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ITGA5	P08648	1049 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	FPR3	P25089	353 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	RPL4	P36578	427 aa	Known RBP	10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	GSS	P48637	474 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	IST1	P53990	364 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	CTXN1	P60606	82 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	TOP3A	Q13472	1001 aa	Predicted RBP	10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	GK3P	Q14409	553 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	TAF11	Q15544	211 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ACKR1	Q16570	336 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	LINGO2	Q7L985	606 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	HDDC2	Q7Z4H3	204 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	TMEM179B	Q7Z7N9	219 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	LRRC75A	Q8NAA5	344 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	OR6N1	Q8NGY5	312 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	OR6X1	Q8NH79	312 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	FANK1	Q8TC84	345 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ASB10	Q8WXI3	467 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	S100PBP	Q96BU1	408 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	DUS3L	Q96G46	650 aa	Known RBP	10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	MED18	Q9BUE0	208 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	POLDIP3	Q9BY77	421 aa	Known RBP	10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ACTR6	Q9GZN1	396 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	TXNIP	Q9H3M7	391 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	B3GAT2	Q9NPZ5	323 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ARMC1	Q9NVT9	282 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	TAS2R16	Q9NYV7	291 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	CRIM1	Q9NZV1	1036 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	SIGLEC7	Q9Y286	467 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	GPR52	Q9Y2T5	361 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	AP4S1	Q9Y587	144 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	AKAP6	Q13023	2319 aa		10.19	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ROS1	P08922	2347 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	NBPF19	A0A087WUL8	3843 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ABCA12	Q86UK0	2595 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	NPIPB13	A6NJU9	1138 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	NPIPB4	C9JG80	1138 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845		M0R3G1	203 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	PDLIM1	O00151	329 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	HNRNPR	O43390	633 aa	Known RBP	10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	PTP4A3	O75365	173 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	NDUFB2	O95178	105 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	GAST	P01350	101 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	IGHM	P01871	453 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	PPP3CB	P16298	524 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ZNF26	P17031	533 aa	Predicted RBP	10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	CDH2	P19022	906 aa	Predicted RBP	10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	MPG	P29372	298 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	CSNK1A1	P48729	337 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	CLRN1	P58418	232 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	FXYD6P3	P58550	94 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ACTR3	P61158	418 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	RPL27	P61353	136 aa	Known RBP	10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ERVK-25	P63136	954 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ROR2	Q01974	943 aa	Known RBP	10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	TSPAN31	Q12999	210 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	PHYHD1	Q5SRE7	291 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	HMBOX1	Q6NT76	420 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	SMARCD3	Q6STE5	483 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	C20orf196	Q8IYI0	205 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	AQP11	Q8NBQ7	271 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	OR10G2	Q8NGC3	310 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	GIPC3	Q8TF64	312 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	FAM222B	Q8WU58	562 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ZNF566	Q969W8	418 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	MARVELD3	Q96A59	401 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	SLC25A44	Q96H78	314 aa	Predicted RBP	10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	LRR1	Q96L50	414 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	WFIKKN1	Q96NZ8	548 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	TSPAN32	Q96QS1	320 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	KATNB1	Q9BVA0	655 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	OR10A4	Q9H209	315 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	GPR35	Q9HC97	309 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	KCNN3	Q9UGI6	736 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	IL20RA	Q9UHF4	553 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	UNC79	Q9P2D8	2635 aa		10.18	□□□□□ -0.78
ATP2A3-208	ENST00000570845	RPL36A-HNRNPH2	H7BZ11	118 aa		10.17	□□□□□ -0.78
ATP2A3-208	ENST00000570845	IGHG1	P01857	330 aa		10.17	□□□□□ -0.78
ATP2A3-208	ENST00000570845	PGA4	P0DJD7	388 aa		10.17	□□□□□ -0.78
ATP2A3-208	ENST00000570845	PGA3	P0DJD8	388 aa		10.17	□□□□□ -0.78
ATP2A3-208	ENST00000570845	EPX	P11678	715 aa		10.17	□□□□□ -0.78
ATP2A3-208	ENST00000570845	FCGR1A	P12314	374 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms