RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 PRSS50Q9UI38 385 aa8.09□□□□□ -1.11
CAPN3-219ENST00000569136 ST6GALNAC2Q9UJ37 374 aa8.09□□□□□ -1.11
CAPN3-219ENST00000569136 RIMS3Q9UJD0 308 aa8.09□□□□□ -1.11
CAPN3-219ENST00000569136 RPS6KA6Q9UK32 745 aa8.09□□□□□ -1.11
CAPN3-219ENST00000569136 RCE1Q9Y256 329 aa8.09□□□□□ -1.11
CAPN3-219ENST00000569136 COA3Q9Y2R0 106 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-219ENST00000569136 NOX1Q9Y5S8 564 aa8.09□□□□□ -1.11
CAPN3-219ENST00000569136 FBN2P35556 2912 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 CPSF4LA6NMK7 179 aaKnown RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF726A6NNF4 738 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 MS4A18H0YCH9 400 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 PDLIM1O00151 329 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 PLPP3O14495 311 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 TMCC2O75069 709 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 BGLAPP02818 100 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 RAF1P04049 648 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 NQO1P15559 274 aaKnown RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 COX5AP20674 150 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 CCKARP32238 428 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 GSK3BP49841 420 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 CRYBA2P53672 197 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 TAS2R41P59536 307 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 SRSF3P84103 164 aaKnown RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 ST3GAL3Q11203 375 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 ZP4Q12836 540 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 FAPQ12884 760 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 KEAP1Q14145 624 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 PPA1Q15181 289 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 TAB1Q15750 504 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 MS4A18Q3C1V0 323 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 LRRC23Q53EV4 343 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 SAMD4BQ5PRF9 694 aaKnown RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 KLHL17Q6TDP4 642 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 FKBP9P1Q75LS8 142 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 RBM45Q8IUH3 476 aaKnown RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 EPHX4Q8IUS5 362 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 UEVLDQ8IX04 471 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 CCDC36Q8IYA8 594 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 C17orf78Q8N4C9 275 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 VANGL1Q8TAA9 524 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 GEMIN6Q8WXD5 167 aaKnown RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 POP5Q969H6 163 aaKnown RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 PIGTQ969N2 578 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 PIK3IP1Q96FE7 263 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 NSL1Q96IY1 281 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 TPD52L3Q96J77 140 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 LRR1Q96L50 414 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF385AQ96PM9 386 aaKnown RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF426Q9BUY5 554 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 LINC00470Q9BZP3 86 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 GORASP2Q9H8Y8 452 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 FKRPQ9H9S5 495 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 OBP2BQ9NPH6 170 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 NANSQ9NR45 359 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 ADA2Q9NZK5 511 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 FBXL7Q9UJT9 491 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 ADAM21Q9UKJ8 722 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 SLC7A7Q9UM01 511 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 MAGED1Q9Y5V3 778 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-219ENST00000569136 ALPK2Q86TB3 2170 aa8.08□□□□□ -1.12
CAPN3-219ENST00000569136 OR5H1A6NKK0 313 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF587BE7ETH6 402 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 RPL36A-HNRNPH2H7BZ11 118 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 NME4O00746 187 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 SLC43A1O75387 559 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 LYZL6O75951 148 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF432O94892 652 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 LYPD3O95274 346 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 IGHV3-9P01782 118 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 MT-ND1P03886 318 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 IFNW1P05000 195 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 HSD17B1P14061 328 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 AHCYP23526 432 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 SH3BGRP55822 239 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-219ENST00000569136 CLDN17P56750 224 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 PRPS1P60891 318 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 IL1RL1Q01638 556 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 LTBQ06643 244 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 PUDPQ08623 228 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 PIN1Q13526 163 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-219ENST00000569136 ACKR1Q16570 336 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF74Q16587 644 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 IFI44LQ53G44 452 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 TSPO2Q5TGU0 170 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 GLYATQ6IB77 296 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 HMBOX1Q6NT76 420 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 ADAM5Q6NVV9 412 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 C16orf89Q6UX73 402 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 DEF8Q6ZN54 512 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 CYP4Z1Q86W10 505 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 P3H2Q8IVL5 708 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 RNF113BQ8IZP6 322 aaKnown RBP8.07□□□□□ -1.12
CAPN3-219ENST00000569136 PGAM4Q8N0Y7 254 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 ARHGAP24Q8N264 748 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 KDM8Q8N371 416 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 CCDC197Q8NCU1 140 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 PIK3C3Q8NEB9 887 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 OR4D11Q8NGI4 311 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 OR5J2Q8NH18 312 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 LIPHQ8WWY8 451 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms