RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PRPF18Q99633 342 aaKnown RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 SLC6A7Q99884 636 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 KCNS3Q9BQ31 491 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 CDC42EP4Q9H3Q1 356 aaKnown RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 NARFLQ9H6Q4 476 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 ESM1Q9NQ30 184 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 SLC7A10Q9NS82 523 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 GRHL1Q9NZI5 618 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 SH3BP4Q9P0V3 963 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 ARMCX1Q9P291 453 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 UPB1Q9UBR1 384 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 GRIP1Q9Y3R0 1128 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 POLR3HQ9Y535 204 aaPredicted RBP4.83□□□□□ -1.64
CDH13-211ENST00000568770 TIMM22Q9Y584 194 aa4.83□□□□□ -1.64
CDH13-211ENST00000568770 KMT2CQ8NEZ4 4911 aaKnown RBP4.82□□□□□ -1.64
CDH13-211ENST00000568770 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 SH3PXD2BA1X283 911 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 H3BNH8 94 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 hCG_2039718K7EN88 272 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 M0R3H8 397 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 GPR171O14626 319 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 WNT9BO14905 357 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 ZNF264O43296 627 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 PDE5AO76074 875 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 PNPP00491 289 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 CRYAAP02489 173 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 TFPIP10646 304 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 TCP1P17987 556 aaKnown RBP4.82□□□□□ -1.64
CDH13-211ENST00000568770 ATP6V1C1P21283 382 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 THBS4P35443 961 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 KHKP50053 298 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 PROK1P58294 105 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 IL1RL1Q01638 556 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 GUCY2DQ02846 1103 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 MERTKQ12866 999 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 UNC50Q53HI1 259 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 SYT14P1Q58G82 188 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 TSPO2Q5TGU0 170 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 LIN54Q6MZP7 749 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 NOXRED1Q6NXP6 359 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 CDC73Q6P1J9 531 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 ZCCHC12Q6PEW1 402 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 KLHL24Q6TFL4 600 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 CASP12Q6UXS9 341 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 CARM1Q86X55 608 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 ZNF614Q8N883 585 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 ZDHHC22Q8N966 263 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 BOLLQ8N9W6 283 aaKnown RBP4.82□□□□□ -1.64
CDH13-211ENST00000568770 OR51F2Q8NH61 342 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 CHMP6Q96FZ7 201 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 EGLN2Q96KS0 407 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 ZNF382Q96SR6 550 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 DOK1Q99704 481 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 MRPL57Q9BQC6 102 aaKnown RBP4.82□□□□□ -1.64
CDH13-211ENST00000568770 ERP44Q9BS26 406 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 THUMPD3Q9BV44 507 aaKnown RBP4.82□□□□□ -1.64
CDH13-211ENST00000568770 KATNB1Q9BVA0 655 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 SUCNR1Q9BXA5 334 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 HOXD1Q9GZZ0 328 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 TPK1Q9H3S4 243 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 SERINC1Q9NRX5 453 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 GRHPRQ9UBQ7 328 aa4.82□□□□□ -1.64
CDH13-211ENST00000568770 FBXO9Q9UK97 447 aaPredicted RBP4.82□□□□□ -1.64
CDH13-211ENST00000568770 TMEM129A0AVI4 362 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 NPIPB9F8W1W9 429 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 CCDC188H7C350 402 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 EIF4E2O60573 245 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 SKAP2O75563 359 aaPredicted RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 PMS2P2O95744 297 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 CSTBP04080 98 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 HMGN2P05204 90 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 ENO1P06733 434 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 IGFBP1P08833 259 aaPredicted RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 ADRA2AP08913 450 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 CECR9P0C854 216 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 SAGP10523 405 aaPredicted RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 UBL4AP11441 157 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 ADRA2CP18825 462 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 NPR2P20594 1047 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 EFNA1P20827 205 aaPredicted RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 COL8A2P25067 703 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 MPGP29372 298 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 CALCRP30988 508 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 MAGEA8P43361 318 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 MAGEA12P43365 314 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 ATP12AP54707 1039 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 PLTPP55058 493 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 FOXA1P55317 472 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 UBA52P62987 128 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 TUBA1BP68363 451 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 TUBA4AP68366 448 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 H3F3AP84243 136 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 HOXA4Q00056 320 aaPredicted RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 NAAAQ02083 359 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 SKP2Q13309 424 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 LASP1Q14847 261 aaKnown RBP4.81□□□□□ -1.64
CDH13-211ENST00000568770 KRT72Q14CN4 511 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 ELFN2Q5R3F8 820 aa4.81□□□□□ -1.64
CDH13-211ENST00000568770 ZNF678Q5SXM1 525 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms