RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ICE1Q9Y2F5 2266 aa15.89■□□□□ 0.13
COMMD4-222ENST00000568034 A0A1W2PRG6 482 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 SAC3D1A6NKF1 404 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 AKAP8O43823 692 aaKnown RBP15.88■□□□□ 0.13
COMMD4-222ENST00000568034 UPK3AO75631 287 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 ZNF23P17027 643 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 COX5AP20674 150 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 DAPP51397 102 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 FOXG1P55316 489 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-222ENST00000568034 CAMK2DQ13557 499 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 RFX4Q33E94 735 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 PHYHD1Q5SRE7 291 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 FBXW9Q5XUX1 488 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 KLHL17Q6TDP4 642 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 Q6ZT83 130 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 HIPK1Q86Z02 1210 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 C20orf196Q8IYI0 205 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 SVOPLQ8N434 492 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 CLDN22Q8N7P3 220 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 ZNF519Q8TB69 540 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 SAMD8Q96LT4 415 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 ADAD1Q96M93 576 aaKnown RBP15.88■□□□□ 0.13
COMMD4-222ENST00000568034 EGLN3Q9H6Z9 239 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 IL20Q9NYY1 176 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 ZNF346Q9UL40 294 aaKnown RBP15.88■□□□□ 0.13
COMMD4-222ENST00000568034 ADAM18Q9Y3Q7 739 aa15.88■□□□□ 0.13
COMMD4-222ENST00000568034 G3V2T6 193 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 SLC43A1O75387 559 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 SOX14O95416 240 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 CNOT4O95628 575 aaKnown RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 BCL10O95999 233 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 PGA4P0DJD7 388 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 PGA3P0DJD8 388 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 ANXA8P13928 327 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 GSTM3P21266 225 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 PCYT1AP49585 367 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 DAP3P51398 398 aaKnown RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 RPL27P61353 136 aaKnown RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 ERVK-25P63136 954 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 FAM27E3Q08E93 113 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 TOP3AQ13472 1001 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 TAF11Q15544 211 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 CARD17Q5XLA6 110 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 DPY19L2P2Q6ZN68 376 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 BEND4Q6ZU67 534 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 ZNF771Q7L3S4 317 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 STK32CQ86UX6 486 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 ZDHHC13Q8IUH4 622 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 ACBD4Q8NC06 268 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 ICA1LQ8NDH6 482 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 HDAC2Q92769 488 aaKnown RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 STMN2Q93045 179 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 PSMG3-AS1Q96PY0 264 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 ALKBH3Q96Q83 286 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 POLDIP3Q9BY77 421 aaKnown RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 MRPL13Q9BYD1 178 aaKnown RBP15.87■□□□□ 0.13
COMMD4-222ENST00000568034 LINC00470Q9BZP3 86 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 COL12A1Q99715 3063 aa15.87■□□□□ 0.13
COMMD4-222ENST00000568034 A1L4Q6 167 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 TRMUO75648 421 aaKnown RBP15.86■□□□□ 0.13
COMMD4-222ENST00000568034 PPP1R3DO95685 299 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 TXNDC12O95881 172 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 ITGA5P08648 1049 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 IGFBP2P18065 325 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 IGHV1-2P23083 117 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 SLC6A6P31641 620 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 RPL4P36578 427 aaKnown RBP15.86■□□□□ 0.13
COMMD4-222ENST00000568034 CD79BP40259 229 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 ARHGDIAP52565 204 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 PPP2R2BQ00005 443 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 COX10Q12887 443 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 STAC2Q6ZMT1 411 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 ATG16L2Q8NAA4 619 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 POMGNT2Q8NAT1 580 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 TMEM54Q969K7 222 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 NMD3Q96D46 503 aaKnown RBP15.86■□□□□ 0.13
COMMD4-222ENST00000568034 SLC25A44Q96H78 314 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-222ENST00000568034 LRR1Q96L50 414 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 Q96M85 177 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 SMURF2Q9HAU4 748 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 ELOVL5Q9NYP7 299 aa15.86■□□□□ 0.13
COMMD4-222ENST00000568034 TMEFF2Q9UIK5 374 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-222ENST00000568034 OR6C65A6NJZ3 312 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 ZNF726A6NNF4 738 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 BHLHE40O14503 412 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 APEHP13798 732 aaKnown RBP15.85■□□□□ 0.13
COMMD4-222ENST00000568034 ACADSP16219 412 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 FAPQ12884 760 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 RCN1Q15293 331 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 HIST3H3Q16695 136 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 SLC36A3Q495N2 470 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 MESTQ5EB52 335 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 KDM4DQ6B0I6 523 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 RPL13AP3Q6NVV1 102 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 CXorf67Q86X51 503 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-222ENST00000568034 UBE2J2Q8N2K1 259 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 ARIH2OSQ8N7S6 290 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 NOXO1Q8NFA2 376 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 OR4Q3Q8NH05 313 aa15.85■□□□□ 0.13
COMMD4-222ENST00000568034 RASD2Q96D21 266 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms