RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OR13C2Q8NGS9 318 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 OR6X1Q8NH79 312 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 ASB10Q8WXI3 467 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 BCL2L2Q92843 193 aaPredicted RBP8.59□□□□□ -1.03
CLK3-220ENST00000567992 TMEM54Q969K7 222 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 ASB9Q96DX5 294 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 PLPPR2Q96GM1 343 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 SEPHS2Q99611 448 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 THTPAQ9BU02 230 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 GPR35Q9HC97 309 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 IL1RAPQ9NPH3 570 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 SLC17A5Q9NRA2 495 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 CADP27708 2225 aa8.59□□□□□ -1.03
CLK3-220ENST00000567992 TRAV27A0A087WT01 109 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 CIB4A0PJX0 185 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 ZNF503-AS2A6NEH8 195 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 DPRXA6NFQ7 191 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 NPIPB13A6NJU9 1138 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 NPIPB4C9JG80 1138 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 M0R3G1 203 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 GYG2O15488 501 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 CLOCKO15516 846 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 IGHMP01871 453 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 HIST1H2ABP04908 130 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 F13BP05160 661 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 PGA4P0DJD7 388 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 PGA3P0DJD8 388 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 ITGA2P17301 1181 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 OMPP47874 163 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 SLC9A3P48764 834 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 SH3BGRP55822 239 aaPredicted RBP8.58□□□□□ -1.04
CLK3-220ENST00000567992 FXYD6P3P58550 94 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 ARF1P84077 181 aaKnown RBP8.58□□□□□ -1.04
CLK3-220ENST00000567992 BSPH1Q075Z2 132 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 ACKR1Q16570 336 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 CEACAM16Q2WEN9 425 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 TBRG1Q3YBR2 411 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 FGD3Q5JSP0 725 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 NCMAPQ5T1S8 102 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 ARMC4Q5T2S8 1044 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 ALKBH2Q6NS38 261 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 HIST3H2AQ7L7L0 130 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 OR52N5Q8NH56 324 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 OR52J3Q8NH60 311 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 LILRB1Q8NHL6 650 aaPredicted RBP8.58□□□□□ -1.04
CLK3-220ENST00000567992 HIST1H2ACQ93077 130 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 MS4A3Q96HJ5 214 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 FAM46AQ96IP4 442 aaKnown RBP8.58□□□□□ -1.04
CLK3-220ENST00000567992 LRR1Q96L50 414 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 ADAD1Q96M93 576 aaKnown RBP8.58□□□□□ -1.04
CLK3-220ENST00000567992 GPA33Q99795 319 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 BTBD10Q9BSF8 475 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 CADM1Q9BY67 442 aaKnown RBP8.58□□□□□ -1.04
CLK3-220ENST00000567992 MRPL13Q9BYD1 178 aaKnown RBP8.58□□□□□ -1.04
CLK3-220ENST00000567992 MAGIXQ9H6Y5 334 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 CRLF2Q9HC73 371 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 INIPQ9NRY2 104 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 ST6GALNAC2Q9UJ37 374 aa8.58□□□□□ -1.04
CLK3-220ENST00000567992 FAM32AQ9Y421 112 aaKnown RBP8.58□□□□□ -1.04
CLK3-220ENST00000567992 PLCE1Q9P212 2302 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 CREBBPQ92793 2442 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 ARPC4-TTLL3A0A0A6YYG9 625 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 SH3PXD2BA1X283 911 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 EFCAB9A8MZ26 197 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 DNAJC8O75937 253 aaPredicted RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 KRT33AO76009 404 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 SEC14L2O76054 403 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 ATE1O95260 518 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 SAGP10523 405 aaPredicted RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 CDH2P19022 906 aaPredicted RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 RRM2P31350 389 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 CSNK1A1P48729 337 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 NR1H2P55055 460 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 SPIBQ01892 262 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 TGFBR3Q03167 851 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 SPOCK1Q08629 439 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 TRAP1Q12931 704 aaKnown RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 LAPTM4AQ15012 233 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 HIST3H3Q16695 136 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 ALG10Q5BKT4 473 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 HMBOX1Q6NT76 420 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 ZNF704Q6ZNC4 412 aaPredicted RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 ZNF627Q7L945 461 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 SSX8Q7RTT4 187 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 ABHD12BQ7Z5M8 362 aaPredicted RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 IGFN1Q86VF2 1251 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 ZDHHC21Q8IVQ6 265 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 ADGRG5Q8IZF4 528 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 GPR137CQ8N3F9 429 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 OR4K5Q8NGD3 323 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 OR4C15Q8NGM1 316 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 OR51A7Q8NH64 312 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 MAGEE2Q8TD90 523 aaPredicted RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 IGFBPL1Q8WX77 278 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 MCUR1Q96AQ8 359 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 NMD3Q96D46 503 aaKnown RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 SLC25A44Q96H78 314 aaPredicted RBP8.57□□□□□ -1.04
CLK3-220ENST00000567992 TSPAN32Q96QS1 320 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 TNFRSF13CQ96RJ3 184 aa8.57□□□□□ -1.04
CLK3-220ENST00000567992 VNN3Q9NY84 501 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms