RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SH2D2AQ9NP31 389 aa13.17□□□□□ -0.3
COMMD4-221ENST00000567935 KLHL1Q9NR64 748 aa13.17□□□□□ -0.3
COMMD4-221ENST00000567935 FOXJ2Q9P0K8 574 aa13.17□□□□□ -0.3
COMMD4-221ENST00000567935 ADAM18Q9Y3Q7 739 aa13.17□□□□□ -0.3
COMMD4-221ENST00000567935 SDK2Q58EX2 2172 aa13.17□□□□□ -0.3
COMMD4-221ENST00000567935 PCNX3Q9H6A9 2034 aa13.17□□□□□ -0.3
COMMD4-221ENST00000567935 CELSR2Q9HCU4 2923 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 LOC100506127A0A0U1RQW1 187 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 ZC3H12DA2A288 527 aaKnown RBP13.16□□□□□ -0.3
COMMD4-221ENST00000567935 A6NIZ1 184 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-221ENST00000567935 FTCDNL1E5RQL4 147 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 STMND1H3BQB6 276 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 XKRYO14609 159 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 GLCEO94923 617 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 MT-ND5P03915 603 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 GAAP10253 952 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 SPI1P17947 270 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 GRPRP30550 384 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 IDUAP35475 653 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 DLSTP36957 453 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 RAP1BP61224 184 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 LSM3P62310 102 aaKnown RBP13.16□□□□□ -0.3
COMMD4-221ENST00000567935 RAP1AP62834 184 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 FOXF1Q12946 379 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 DCTN2Q13561 401 aaKnown RBP13.16□□□□□ -0.3
COMMD4-221ENST00000567935 TRAM1Q15629 374 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 OR2G6Q5TZ20 316 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 FCRLBQ6BAA4 426 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 LEG1Q6P5S2 330 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 POMZP3Q6PJE2 187 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 IL20RBQ6UXL0 311 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 SHFQ7M4L6 423 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 LHFPL3Q86UP9 236 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 CROCCP3Q8IVE0 287 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 SYS1Q8N2H4 156 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 ARIH2OSQ8N7S6 290 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 ADPRHL1Q8NDY3 354 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 OR10H4Q8NGA5 316 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 HAVCR2Q8TDQ0 301 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 SSC4DQ8WTU2 575 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 S100ZQ8WXG8 99 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 SMPDL3BQ92485 455 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 RASD2Q96D21 266 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 TMEM41AQ96HV5 264 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 Q96M85 177 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 NMNAT3Q96T66 252 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 MMP27Q9H306 513 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 FANCFQ9NPI8 374 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 TRIM36Q9NQ86 728 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 ZNF71Q9NQZ8 489 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-221ENST00000567935 SACM1LQ9NTJ5 587 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 ASB6Q9NWX5 421 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 P4HTMQ9NXG6 502 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 ALKBH4Q9NXW9 302 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 TAS2R5Q9NYW4 299 aa13.16□□□□□ -0.3
COMMD4-221ENST00000567935 POLQO75417 2590 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 C17orf51A8MQB3 221 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 PLPP3O14495 311 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 SNPHO15079 494 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 CELA2AP08217 269 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 SOX6P35712 828 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 RPL27P61353 136 aaKnown RBP13.15□□□□□ -0.3
COMMD4-221ENST00000567935 SELENBP1Q13228 472 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 LIPKQ5VXJ0 399 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 OR5M10Q6IEU7 315 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 ARSKQ6UWY0 536 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 GATAD2BQ8WXI9 593 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 SLC25A36Q96CQ1 311 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 TSPAN32Q96QS1 320 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 TXNIPQ9H3M7 391 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 PLGRKTQ9HBL7 147 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 PALMDQ9NP74 551 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 BABAM2Q9NXR7 383 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 TUBD1Q9UJT1 453 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 B3GALT5Q9Y2C3 310 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 GSTK1Q9Y2Q3 226 aa13.15□□□□□ -0.3
COMMD4-221ENST00000567935 CRYBG3Q68DQ2 2970 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 A0A1W2PRG6 482 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF670-ZNF695F2Z2N8 137 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 SEC14L5O43304 696 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 RNF13O43567 381 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 GPX5O75715 221 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 HLA-DPB1P04440 258 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 FGF9P31371 208 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 CDKN2AP42771 156 aaKnown RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 CRYBB2P43320 205 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 DAP3P51398 398 aaKnown RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 DSCR4P56555 118 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 RPS18P62269 152 aaKnown RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 PUDPQ08623 228 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 MRPL28Q13084 256 aaKnown RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF829Q3KNS6 432 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 GLYR1Q49A26 553 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-221ENST00000567935 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 C1QL3Q5VWW1 255 aa13.14□□□□□ -0.31
COMMD4-221ENST00000567935 BICRALQ6AI39 1079 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms