RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 OR2M2Q96R28 347 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 MED18Q9BUE0 208 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 POLDIP3Q9BY77 421 aaKnown RBP10.75□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF226Q9NYT6 803 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 KCNN3Q9UGI6 736 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 MGAT4BQ9UQ53 548 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 AP4S1Q9Y587 144 aa10.75□□□□□ -0.69
SF3B3-208ENST00000567250 CIB4A0PJX0 185 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 SH3D21A4FU49 640 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 A6NIZ1 184 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 KLF4O43474 513 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 TIPRLO75663 272 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 LYZL6O75951 148 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 GOSR1O95249 250 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 MPGP29372 298 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 CCKARP32238 428 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 GSSP48637 474 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 CSNK1A1P48729 337 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 CLRN1P58418 232 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 RAP1BP61224 184 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 RAP1AP62834 184 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 MELKQ14680 651 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 KPNB1Q14974 876 aaKnown RBP10.74□□□□□ -0.69
SF3B3-208ENST00000567250 MICAQ29983 383 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 C1QTNF12Q5T7M4 302 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 SP5Q6BEB4 398 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-208ENST00000567250 HMBOX1Q6NT76 420 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 SMARCD3Q6STE5 483 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 KLHL24Q6TFL4 600 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 STAC2Q6ZMT1 411 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 BHLHA15Q7RTS1 189 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-208ENST00000567250 ZER1Q7Z7L7 766 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 TMEM123Q8N131 208 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 C17orf78Q8N4C9 275 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 AQP11Q8NBQ7 271 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 NOXO1Q8NFA2 376 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 OR9Q2Q8NGE9 314 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 OR6N1Q8NGY5 312 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 MOSPD2Q8NHP6 518 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 GIPC3Q8TF64 312 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 FAM222BQ8WU58 562 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 ASB10Q8WXI3 467 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 SLCO4A1Q96BD0 722 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 GPX7Q96SL4 187 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-208ENST00000567250 BDH2Q9BUT1 245 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 EMC6Q9BV81 110 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 ULBP2Q9BZM5 246 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 ACTR6Q9GZN1 396 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 TXNIPQ9H3M7 391 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 SLC7A10Q9NS82 523 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 KIF17Q9P2E2 1029 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 SIGLEC7Q9Y286 467 aa10.74□□□□□ -0.69
SF3B3-208ENST00000567250 HECTD1Q9ULT8 2610 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 RPL36A-HNRNPH2H7BZ11 118 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 XKRYO14609 159 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 CASKO14936 926 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 ENTPD5O75356 428 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 CD14P08571 375 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 IGHV1-2P23083 117 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 EDNRAP25101 427 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 SLC6A6P31641 620 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 NTF4P34130 210 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 RPS6KA3P51812 740 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 CTXN1P60606 82 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 RPL27P61353 136 aaKnown RBP10.73□□□□□ -0.69
SF3B3-208ENST00000567250 PPP1R8Q12972 351 aaKnown RBP10.73□□□□□ -0.69
SF3B3-208ENST00000567250 TOP3AQ13472 1001 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-208ENST00000567250 STK11Q15831 433 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 ATP6AP1Q15904 470 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 ACKR1Q16570 336 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 CARD17Q5XLA6 110 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF620Q6ZNG0 422 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 P2RY8Q86VZ1 359 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 MEX3DQ86XN8 651 aaKnown RBP10.73□□□□□ -0.69
SF3B3-208ENST00000567250 DNAJC9Q8WXX5 260 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 STMN2Q93045 179 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 NRBF2Q96F24 287 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF570Q96NI8 536 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 DACH2Q96NX9 599 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 TNFRSF13CQ96RJ3 184 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 KATNB1Q9BVA0 655 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 DGCR6LQ9BY27 220 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 OR52D1Q9H346 318 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF556Q9HAH1 456 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 VNN3Q9NY84 501 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 GRHPRQ9UBQ7 328 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 CDH10Q9Y6N8 788 aa10.73□□□□□ -0.69
SF3B3-208ENST00000567250 CRYBG3Q68DQ2 2970 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 M0R3G1 203 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 PDLIM1O00151 329 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 UPK3AO75631 287 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 RAD51DO75771 328 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 ITGA5P08648 1049 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 PGA4P0DJD7 388 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 PGA3P0DJD8 388 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 ANXA8P13928 327 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 SDHAP31040 664 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 ROR2Q01974 943 aaKnown RBP10.72□□□□□ -0.69
SF3B3-208ENST00000567250 COX10Q12887 443 aa10.72□□□□□ -0.69
SF3B3-208ENST00000567250 CAMK2DQ13557 499 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms