RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ICE1Q9Y2F5 2266 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 TEX13CA0A0J9YWL9 993 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 A6NIZ1 184 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 SLC22A31A6NKX4 558 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 CDK1P06493 297 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 ATP6V1B1P15313 513 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 RPL5P46777 297 aaKnown RBP17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 P2RY4P51582 365 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 SLC25A1P53007 311 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 RAP1BP61224 184 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 RAP1AP62834 184 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 ZNF91Q05481 1191 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 LGALS3BPQ08380 585 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 KRR1Q13601 381 aaKnown RBP17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 CRMP1Q14194 572 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 ACKR1Q16570 336 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 NIPAL3Q6P499 406 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 Q6ZS92 163 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 MEPCEQ7L2J0 689 aaKnown RBP17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 HDDC2Q7Z4H3 204 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 GGNQ86UU5 652 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 STX19Q8N4C7 294 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 SVOPQ8N4V2 548 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 TMEM99Q8N816 258 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 NPEPL1Q8NDH3 523 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 OR2V1Q8NHB1 315 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 PTP4A1Q93096 173 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 RASD2Q96D21 266 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 ADGRG7Q96K78 797 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 SIGLEC11Q96RL6 698 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 ERVK-18Q9QC07 812 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 PCDHGB1Q9Y5G3 927 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 KIAA1549Q9HCM3 1950 aa17.07■□□□□ 0.32
CSPG4P13-201ENST00000565545 NPIPA5E9PKD4 350 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 XKRYO14609 159 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 TNFSF11O14788 317 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 AHCYL1O43865 530 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 RENP00797 406 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 HTR1AP08908 422 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 MTNR1AP48039 350 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 CARD18P57730 90 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 HSF1Q00613 529 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 RAB40BQ12829 278 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 SLC35D3Q5M8T2 416 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 HBMQ6B0K9 141 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 TMEM225Q6GV28 225 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 RPUSD3Q6P087 351 aaKnown RBP17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 BCDIN3DQ7Z5W3 292 aaKnown RBP17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 UEVLDQ8IX04 471 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 SPARTQ8N0X7 666 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 SDR9C7Q8NEX9 313 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 ZNF519Q8TB69 540 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 RELTQ969Z4 430 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 PAQR5Q9NXK6 330 aaPredicted RBP17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 NPIPA1Q9UND3 350 aa17.06■□□□□ 0.32
CSPG4P13-201ENST00000565545 A1L4Q6 167 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 FAM183AA6NL82 134 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 EIF1AYO14602 144 aaKnown RBP17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 BCL10O95999 233 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 CELA3AP09093 270 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 ZNF24P17028 368 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 ACVR1BP36896 505 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 LHX2P50458 406 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 CLDN20P56880 219 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 RPS3AP61247 264 aaKnown RBP17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 MVKQ03426 396 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 ST3GAL4Q11206 333 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 POU4F3Q15319 338 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 INAQ16352 499 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 MESTQ5EB52 335 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 LCN1P1Q5VSP4 162 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 RNLSQ5VYX0 342 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 LEG1Q6P5S2 330 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 SLC35D2Q76EJ3 337 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 MEIOBQ8N635 442 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 NEIL3Q8TAT5 605 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 ABTB1Q969K4 478 aaPredicted RBP17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 OTULINQ96BN8 352 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 RNFT2Q96EX2 444 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 TMEM80Q96HE8 168 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 NMNAT3Q96T66 252 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 SF3B5Q9BWJ5 86 aaKnown RBP17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 NMNAT2Q9BZQ4 307 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 CCDC90BQ9GZT6 254 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 SLC6A15Q9H2J7 730 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 FGF20Q9NP95 211 aaPredicted RBP17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 HAO2Q9NYQ3 351 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 B3GAT1Q9P2W7 334 aa17.05■□□□□ 0.32
CSPG4P13-201ENST00000565545 TRGV5A0A0B4J1U4 118 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 TFECO14948 347 aaPredicted RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 PLGP00747 810 aaPredicted RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 IGHG3P01860 377 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 TFAP2AP05549 437 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 ZNF708P17019 499 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 JUNBP17275 347 aaPredicted RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 ENPP1P22413 925 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 SLC2A5P22732 501 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 CDKN2AP42771 156 aaKnown RBP17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 STARP49675 285 aa17.04■□□□□ 0.32
CSPG4P13-201ENST00000565545 CLDN18P56856 261 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms