RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 B4GALT1P15291 398 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 SLC25A16P16260 332 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 TNFRSF1BP20333 461 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ARR3P36575 388 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 CAPZA2P47755 286 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 BIDP55957 195 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 KLF10Q13118 480 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 CYLC2Q14093 348 aaPredicted RBP8.69□□□□□ -1.02
CMTM3-209ENST00000565003 EFNB3Q15768 340 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 C6orf52Q5T4I8 152 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 INTS11Q5TA45 600 aaKnown RBP8.69□□□□□ -1.02
CMTM3-209ENST00000565003 TTC33Q6PID6 262 aaPredicted RBP8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF813Q6ZN06 617 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF627Q7L945 461 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 SLC46A3Q7Z3Q1 461 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ANKS4BQ8N8V4 417 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 NUP37Q8NFH4 326 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 OR4F15Q8NGB8 312 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 OR8J3Q8NGG0 315 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 OR6N1Q8NGY5 312 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 SLC26A7Q8TE54 656 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF75AQ96N20 296 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 TNFRSF13CQ96RJ3 184 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 MDFIQ99750 246 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 VRK1Q99986 396 aaPredicted RBP8.69□□□□□ -1.02
CMTM3-209ENST00000565003 PRSS27Q9BQR3 290 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ULBP2Q9BZM5 246 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 PLK3Q9H4B4 646 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF442Q9H7R0 627 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 MEPEQ9NQ76 525 aaPredicted RBP8.69□□□□□ -1.02
CMTM3-209ENST00000565003 SAR1AQ9NR31 198 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF446Q9NWS9 450 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 B3GNT2Q9NY97 397 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 TAS2R5Q9NYW4 299 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF224Q9NZL3 707 aa8.69□□□□□ -1.02
CMTM3-209ENST00000565003 YLPM1P49750 1951 aaKnown RBP8.68□□□□□ -1.02
CMTM3-209ENST00000565003 RTTNQ86VV8 2226 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF726A6NNF4 738 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 B9A039 149 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 MRASO14807 208 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 SHOX2O60902 331 aaPredicted RBP8.68□□□□□ -1.02
CMTM3-209ENST00000565003 ASAH2BP0C7U1 165 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 TROVE2P10155 538 aaKnown RBP eCLIP8.68□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF14P17017 642 aaPredicted RBP8.68□□□□□ -1.02
CMTM3-209ENST00000565003 THBS4P35443 961 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 CSNK1A1P48729 337 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 ARFIP2P53365 341 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 VLDLRP98155 873 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 PIGFQ07326 219 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 MELKQ14680 651 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 GSG1Q2KHT4 349 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 COQ5Q5HYK3 327 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 SLC35D2Q76EJ3 337 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 CARM1Q86X55 608 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 SNX32Q86XE0 403 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 CCDC36Q8IYA8 594 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 PFN4Q8NHR9 129 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 PROX1Q92786 737 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 MPP4Q96JB8 637 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 FOXB1Q99853 325 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 ECSITQ9BQ95 431 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 SLC19A3Q9BZV2 496 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 B3GAT2Q9NPZ5 323 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 NANSQ9NR45 359 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 POFUT2Q9Y2G5 429 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 SH3GLB1Q9Y371 365 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 FKBP7Q9Y680 259 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 DNHD1Q96M86 4753 aa8.68□□□□□ -1.02
CMTM3-209ENST00000565003 ANK3Q12955 4377 aaKnown RBP8.67□□□□□ -1.02
CMTM3-209ENST00000565003 LOC100653049A0A140TA62 436 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 TMEM129A0AVI4 362 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 BBIP1A8MTZ0 92 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 A8MV72 311 aaPredicted RBP8.67□□□□□ -1.02
CMTM3-209ENST00000565003 VWC2LB2RUY7 222 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 hCG_2039718K7EN88 272 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 RNF13O43567 381 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 KRT34O76011 436 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 OR6A2O95222 327 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 IGFBP1P08833 259 aaPredicted RBP8.67□□□□□ -1.02
CMTM3-209ENST00000565003 PGA4P0DJD7 388 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 PGA3P0DJD8 388 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 CD79AP11912 226 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 NPR2P20594 1047 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 USF1P22415 310 aaPredicted RBP8.67□□□□□ -1.02
CMTM3-209ENST00000565003 PTDSS1P48651 473 aaKnown RBP8.67□□□□□ -1.02
CMTM3-209ENST00000565003 PPOXP50336 477 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 UGT2B15P54855 530 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 ZP4Q12836 540 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 SNTB2Q13425 540 aaKnown RBP8.67□□□□□ -1.02
CMTM3-209ENST00000565003 MSMPQ1L6U9 139 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 MMEL1Q495T6 779 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 KRT80Q6KB66 452 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 DEF8Q6ZN54 512 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 HIPK1Q86Z02 1210 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 NKAIN4Q8IVV8 208 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 CDK20Q8IZL9 346 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 ZCCHC24Q8N2G6 241 aaKnown RBP8.67□□□□□ -1.02
CMTM3-209ENST00000565003 SVOPLQ8N434 492 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 OR6X1Q8NH79 312 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms