RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 HIST1H2BOP23527 126 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CORO1AP31146 461 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HIST1H2BBP33778 126 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ARL4AP40617 200 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 EIF1AXP47813 144 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 RAB7AP51149 207 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 AFF3P51826 1226 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CRISP3P54108 245 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 DIO3P55073 304 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ELLP55199 621 aaPredicted RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ATP5IP56385 69 aaPredicted RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HIST1H2BDP58876 126 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ERVFRD-1P60508 538 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 RPS8P62241 208 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 RPS13P62277 151 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HIST1H2BCP62807 126 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 IL13RA1P78552 427 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 PAX5Q02548 391 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 MESP2Q0VG99 397 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 MAP2K5Q13163 448 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CACNA1SQ13698 1873 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF234Q14588 700 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 KIAA0040Q15053 153 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 EBPQ15125 230 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SLC9A3R2Q15599 337 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HIST2H2BEQ16778 126 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SPDYE7PQ495Y7 208 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CRY2Q49AN0 593 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CT45A2Q5DJT8 189 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 UBE2NLQ5JXB2 153 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 FBXO47Q5MNV8 452 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 PRAMEF14Q5SWL7 426 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 PLEKHS1Q5SXH7 462 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SPATA46Q5T0L3 261 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 MRNIPQ6NTE8 343 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SLC27A1Q6PCB7 646 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SMARCD3Q6STE5 483 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 IGF2-ASQ6U949 168 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 NPNTQ6UXI9 565 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 FAM151BQ6UXP7 276 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 UNQ6494/PRO21346Q6UXR6 183 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ABHD15Q6UXT9 468 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CD300LDQ6UXZ3 194 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 FAM83HQ6ZRV2 1179 aaPredicted RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 KCTD9Q7L273 389 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 GPRIN1Q7Z2K8 1008 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 TCEAL8Q8IYN2 117 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 PGBD5Q8N414 524 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 C11orf42Q8N5U0 333 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 OR4S1Q8NGB4 309 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 OR51S1Q8NGJ8 323 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 OR5M8Q8NGP6 311 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 OR6N1Q8NGY5 312 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 RAB40AQ8WXH6 277 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CLEC4DQ8WXI8 215 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ASB17Q8WXJ9 295 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 THAP4Q8WY91 577 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SMPDL3AQ92484 453 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 GBF1Q92538 1859 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 KHSRPQ92945 711 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HIST1H2BHQ93079 126 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 TMEM106AQ96A25 262 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF479Q96JC4 524 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 MRGPRX3Q96LB0 322 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 TEX37Q96LM6 180 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 F2RL3Q96RI0 385 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 P2RX7Q99572 595 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 OSMRQ99650 979 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HIST1H2BNQ99877 126 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HIST1H2BMQ99879 126 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 MICU1Q9BPX6 476 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SLC25A21Q9BQT8 299 aaPredicted RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 DOHHQ9BU89 302 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 RSRP1Q9BUV0 290 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 TSSK6Q9BXA6 273 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 MS4A8Q9BY19 250 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 GPR87Q9BY21 358 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 DUSP16Q9BY84 665 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ACTRT3Q9BYD9 372 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SLC17A9Q9BYT1 436 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 OR2J1Q9GZK6 312 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 LAT2Q9GZY6 243 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 OR10A4Q9H209 315 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 C1orf198Q9H425 327 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 FN3KRPQ9HA64 309 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 Q9N2J8 555 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 SPANXA1Q9NS26 97 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CA10Q9NS85 328 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 MRPL22Q9NWU5 206 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 MARCH2Q9P0N8 246 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 RHCGQ9UBD6 479 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 TESQ9UGI8 421 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 BAZ2BQ9UIF8 2168 aaKnown RBP5.78□□□□□ -1.48
PTPN9-204ENST00000564970 CDC42EP3Q9UKI2 254 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 FAM50BQ9Y247 325 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 HES2Q9Y543 173 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 ARFGEF1Q9Y6D6 1849 aa5.78□□□□□ -1.48
PTPN9-204ENST00000564970 FNDC1Q4ZHG4 1894 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms