RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 ZDHHC13Q8IUH4 622 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 GABRG1Q8N1C3 465 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 PQLC1Q8N2U9 271 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 STMN2Q93045 179 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 APH1AQ96BI3 265 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 GPX7Q96SL4 187 aaPredicted RBP11.02□□□□□ -0.65
KARS-204ENST00000564578 PLA2G12AQ9BZM1 189 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 OR52D1Q9H346 318 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 NRIP3Q9NQ35 241 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 SLC7A10Q9NS82 523 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 PARPBPQ9NWS1 579 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 PTPN13Q12923 2485 aa11.02□□□□□ -0.65
KARS-204ENST00000564578 NPIPB13A6NJU9 1138 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 NPIPB4C9JG80 1138 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 PDLIM1O00151 329 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 ANXA8P13928 327 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 GRNP28799 593 aaKnown RBP11.01□□□□□ -0.65
KARS-204ENST00000564578 BIDP55957 195 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 COX10Q12887 443 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 MELKQ14680 651 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 RFX4Q33E94 735 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 LINGO2Q7L985 606 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 STK32CQ86UX6 486 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 HIPK1Q86Z02 1210 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 ICA1LQ8NDH6 482 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 OR8D4Q8NGM9 314 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 OR6X1Q8NH79 312 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 SAMD8Q96LT4 415 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 KATNB1Q9BVA0 655 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 TXNIPQ9H3M7 391 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 SMURF2Q9HAU4 748 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 MALT1Q9UDY8 824 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 FOXD3Q9UJU5 478 aaPredicted RBP11.01□□□□□ -0.65
KARS-204ENST00000564578 ZNF346Q9UL40 294 aaKnown RBP11.01□□□□□ -0.65
KARS-204ENST00000564578 CRYBG3Q68DQ2 2970 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 ANKHD1Q8IWZ3 2542 aaKnown RBP11.01□□□□□ -0.65
KARS-204ENST00000564578 UPK3AO75631 287 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 SOX14O95416 240 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 BCL10O95999 233 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 IGHMP01871 453 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 CD14P08571 375 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 FOXG1P55316 489 aaPredicted RBP11.01□□□□□ -0.65
KARS-204ENST00000564578 ERVK-25P63136 954 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 CAMK2DQ13557 499 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 RCN1Q15293 331 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 PHYHD1Q5SRE7 291 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 FBXW9Q5XUX1 488 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 Q6ZT83 130 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 ZNF100Q8IYN0 542 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 SVOPLQ8N434 492 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 FANK1Q8TC84 345 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 ASB10Q8WXI3 467 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 TSPAN32Q96QS1 320 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 CIB1Q99828 191 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 MRPL13Q9BYD1 178 aaKnown RBP11.01□□□□□ -0.65
KARS-204ENST00000564578 KCNJ16Q9NPI9 418 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 NPDC1Q9NQX5 325 aaPredicted RBP11.01□□□□□ -0.65
KARS-204ENST00000564578 GALNT8Q9NY28 637 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 TMEFF2Q9UIK5 374 aaPredicted RBP11.01□□□□□ -0.65
KARS-204ENST00000564578 CDH10Q9Y6N8 788 aa11.01□□□□□ -0.65
KARS-204ENST00000564578 A0A1W2PRG6 482 aa11□□□□□ -0.65
KARS-204ENST00000564578 SAC3D1A6NKF1 404 aa11□□□□□ -0.65
KARS-204ENST00000564578 TPPPO94811 219 aa11□□□□□ -0.65
KARS-204ENST00000564578 CNOT4O95628 575 aaKnown RBP11□□□□□ -0.65
KARS-204ENST00000564578 BAG2O95816 211 aa11□□□□□ -0.65
KARS-204ENST00000564578 CLDN1O95832 211 aa11□□□□□ -0.65
KARS-204ENST00000564578 GSTM3P21266 225 aa11□□□□□ -0.65
KARS-204ENST00000564578 RPL4P36578 427 aaKnown RBP11□□□□□ -0.65
KARS-204ENST00000564578 ASCL1P50553 236 aa11□□□□□ -0.65
KARS-204ENST00000564578 RPL27P61353 136 aaKnown RBP11□□□□□ -0.65
KARS-204ENST00000564578 PPP2R2BQ00005 443 aa11□□□□□ -0.65
KARS-204ENST00000564578 FAM27E3Q08E93 113 aa11□□□□□ -0.65
KARS-204ENST00000564578 HIST3H3Q16695 136 aa11□□□□□ -0.65
KARS-204ENST00000564578 KDM4DQ6B0I6 523 aa11□□□□□ -0.65
KARS-204ENST00000564578 DPY19L2P2Q6ZN68 376 aa11□□□□□ -0.65
KARS-204ENST00000564578 BEND4Q6ZU67 534 aa11□□□□□ -0.65
KARS-204ENST00000564578 CLDN22Q8N7P3 220 aa11□□□□□ -0.65
KARS-204ENST00000564578 ATG16L2Q8NAA4 619 aa11□□□□□ -0.65
KARS-204ENST00000564578 ZNF519Q8TB69 540 aa11□□□□□ -0.65
KARS-204ENST00000564578 ZNF837Q96EG3 531 aaPredicted RBP11□□□□□ -0.65
KARS-204ENST00000564578 SLC25A44Q96H78 314 aaPredicted RBP11□□□□□ -0.65
KARS-204ENST00000564578 Q96M85 177 aa11□□□□□ -0.65
KARS-204ENST00000564578 GABARAPL1Q9H0R8 117 aa11□□□□□ -0.65
KARS-204ENST00000564578 SLCO5A1Q9H2Y9 848 aa11□□□□□ -0.65
KARS-204ENST00000564578 PRR14LQ5THK1 2151 aa11□□□□□ -0.65
KARS-204ENST00000564578 C19orf84I3L1E1 186 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 BHLHE40O14503 412 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 PGA4P0DJD7 388 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 PGA3P0DJD8 388 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 ANPEPP15144 967 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 DAP3P51398 398 aaKnown RBP10.99□□□□□ -0.65
KARS-204ENST00000564578 FAPQ12884 760 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 TOP3AQ13472 1001 aaPredicted RBP10.99□□□□□ -0.65
KARS-204ENST00000564578 SLC36A3Q495N2 470 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 CLEC12AQ5QGZ9 265 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 CARD17Q5XLA6 110 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 STAC2Q6ZMT1 411 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 C20orf196Q8IYI0 205 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 ARIH2OSQ8N7S6 290 aa10.99□□□□□ -0.65
KARS-204ENST00000564578 LRR1Q96L50 414 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms