RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 C1orf21Q9H246 121 aa17.75■□□□□ 0.43
CMTM3-206ENST00000563672 TAS2R1Q9NYW7 299 aa17.75■□□□□ 0.43
CMTM3-206ENST00000563672 FAM32AQ9Y421 112 aaKnown RBP17.75■□□□□ 0.43
CMTM3-206ENST00000563672 MAGED1Q9Y5V3 778 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-206ENST00000563672 ARPC4-TTLL3A0A0A6YYG9 625 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 HS3ST1O14792 307 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 CLOCKO15516 846 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 WNT11O96014 354 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 H1F0P07305 194 aaKnown RBP17.74■□□□□ 0.43
CMTM3-206ENST00000563672 HOXC12P31275 282 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 LAPTM4AQ15012 233 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 DEFB113Q30KQ7 82 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 TBPL2Q6SJ96 375 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 TMEM108Q6UXF1 575 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 ZNF730Q6ZMV8 503 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 ZNF611Q8N823 705 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 MOSPD2Q8NHP6 518 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 SLC7A13Q8TCU3 470 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 IGFBPL1Q8WX77 278 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 AKAP1Q92667 903 aaKnown RBP eCLIP17.74■□□□□ 0.43
CMTM3-206ENST00000563672 TMEM54Q969K7 222 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 DHRS1Q96LJ7 313 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 ALPK1Q96QP1 1244 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 C1QTNF6Q9BXI9 259 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 B3GAT2Q9NPZ5 323 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 ACTR3BQ9P1U1 418 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 HIF3AQ9Y2N7 669 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 V9GYQ6 96 aa17.74■□□□□ 0.43
CMTM3-206ENST00000563672 ZNF99A8MXY4 864 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-206ENST00000563672 SHISA9B4DS77 424 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 hCG_2039718K7EN88 272 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 BCL10O95999 233 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 F13BP05160 661 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 PTAFRP25105 342 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 CD40P25942 277 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 CSNK1A1P48729 337 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 MELKQ14680 651 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 ZNF672Q499Z4 452 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-206ENST00000563672 KLHL24Q6TFL4 600 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 SPNS3Q6ZMD2 512 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 OR6N1Q8NGY5 312 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 SLC25A44Q96H78 314 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-206ENST00000563672 PIP5K1AQ99755 562 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 INIPQ9NRY2 104 aa17.73■□□□□ 0.43
CMTM3-206ENST00000563672 BEX4Q9NWD9 120 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-206ENST00000563672 MAP1AP78559 2803 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-206ENST00000563672 A0A096LPE4 126 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 A0A1W2PPZ6 126 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 A0A1W2PRG6 482 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 NPIPB13A6NJU9 1138 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 NPIPB4C9JG80 1138 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 M0R1B8 84 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 ABCD4O14678 606 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 DIRAS1O95057 198 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 ITGA2P17301 1181 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 PAX7P23759 505 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 RPS4XP62701 263 aaKnown RBP17.72■□□□□ 0.43
CMTM3-206ENST00000563672 FHL1Q13642 323 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 PODNL1Q6PEZ8 512 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 TMPRSS11FQ6ZWK6 438 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 ZNF627Q7L945 461 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 MEX3DQ86XN8 651 aaKnown RBP17.72■□□□□ 0.43
CMTM3-206ENST00000563672 LURAP1LQ8IV03 231 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 KBTBD8Q8NFY9 601 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 NEUROG1Q92886 237 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 PIGTQ969N2 578 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 ZNF566Q969W8 418 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 RADILQ96JH8 1075 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 FUZQ9BT04 418 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 ULBP2Q9BZM5 246 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 GLTPQ9NZD2 209 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 PRPF19Q9UMS4 504 aaKnown RBP17.72■□□□□ 0.43
CMTM3-206ENST00000563672 MGAT4BQ9UQ53 548 aa17.72■□□□□ 0.43
CMTM3-206ENST00000563672 RAI1Q7Z5J4 1906 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-206ENST00000563672 EFCAB9A8MZ26 197 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 PGA4P0DJD7 388 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 PGA3P0DJD8 388 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 ATP6V1B2P21281 511 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 UBE2NP61088 152 aaKnown RBP17.71■□□□□ 0.43
CMTM3-206ENST00000563672 RUNX1T1Q06455 604 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 TRIM25Q14258 630 aaKnown RBP17.71■□□□□ 0.43
CMTM3-206ENST00000563672 HIST3H3Q16695 136 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 ANKDD1AQ495B1 522 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 ARMC4Q5T2S8 1044 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 LRFN4Q6PJG9 635 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 CDK20Q8IZL9 346 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 ASB10Q8WXI3 467 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 SEPHS2Q99611 448 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 CCL19Q99731 98 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 MRPL13Q9BYD1 178 aaKnown RBP17.71■□□□□ 0.43
CMTM3-206ENST00000563672 MUC13Q9H3R2 512 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 IL1RAPQ9NPH3 570 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 CRNNQ9UBG3 495 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-206ENST00000563672 HIVEP1P15822 2718 aa17.71■□□□□ 0.43
CMTM3-206ENST00000563672 PRRC2AP48634 2157 aaKnown RBP17.71■□□□□ 0.43
CMTM3-206ENST00000563672 ITPR3Q14573 2671 aa17.7■□□□□ 0.42
CMTM3-206ENST00000563672 TRBV4-1A0A0J9YWV2 114 aa17.7■□□□□ 0.42
CMTM3-206ENST00000563672 CDC42EP2O14613 210 aa17.7■□□□□ 0.42
CMTM3-206ENST00000563672 UBOX5O94941 541 aa17.7■□□□□ 0.42
CMTM3-206ENST00000563672 SAGP10523 405 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms