RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ADAP00813 363 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 CST1P01037 141 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 TSPAN19P0C672 248 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 PSMB1P20618 241 aaKnown RBP13.8□□□□□ -0.2
USB1-208ENST00000563207 PTNP21246 168 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 CBLP22681 906 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 LIMS1P48059 325 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 NR1H2P55055 460 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 ACTR3P61158 418 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 TAF11Q15544 211 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 MS4A18Q3C1V0 323 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 BEX5Q5H9J7 111 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 SEZ6L2Q6UXD5 910 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 CREB3L2Q70SY1 520 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 NANOGNBQ7Z5D8 188 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 LRRC75A-AS1Q8N1F1 130 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 OR4K5Q8NGD3 323 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 TMEM204Q9BSN7 226 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 ARMC1Q9NVT9 282 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 NOSIPQ9Y314 301 aaKnown RBP13.8□□□□□ -0.2
USB1-208ENST00000563207 NOX1Q9Y5S8 564 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 FLVCR1Q9Y5Y0 555 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 LYVE1Q9Y5Y7 322 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 NAV3Q8IVL0 2385 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 OR6C65A6NJZ3 312 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 LRRN3E7EW58 273 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 ARHGEF9O43307 516 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 AKAP8O43823 692 aaKnown RBP13.79□□□□□ -0.2
USB1-208ENST00000563207 MRPL33O75394 65 aaKnown RBP13.79□□□□□ -0.2
USB1-208ENST00000563207 ADORA3P0DMS8 318 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
USB1-208ENST00000563207 FUT4P22083 530 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 OR3A2P47893 321 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 PTH2RP49190 550 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 C1DQ13901 141 aaKnown RBP13.79□□□□□ -0.2
USB1-208ENST00000563207 CCNIQ14094 377 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 TBPL2Q6SJ96 375 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 UEVLDQ8IX04 471 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 ANKK1Q8NFD2 765 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 COX4I2Q96KJ9 171 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 B3GAT1Q9P2W7 334 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 HIF3AQ9Y2N7 669 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 GPR52Q9Y2T5 361 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 SAMHD1Q9Y3Z3 626 aaKnown RBP13.79□□□□□ -0.2
USB1-208ENST00000563207 AP4S1Q9Y587 144 aa13.79□□□□□ -0.2
USB1-208ENST00000563207 NSD1Q96L73 2696 aaPredicted RBP13.79□□□□□ -0.2
USB1-208ENST00000563207 FN1P02751 2386 aaKnown RBP13.78□□□□□ -0.2
USB1-208ENST00000563207 EFCAB9A8MZ26 197 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 GNGT2O14610 69 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 PIP5K1CO60331 668 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 OR10H3O60404 316 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 DEAF1O75398 565 aaPredicted RBP13.78□□□□□ -0.2
USB1-208ENST00000563207 FCGR1AP12314 374 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 PPP3CBP16298 524 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 AHCYP23526 432 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 OMPP47874 163 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 PRPS1P60891 318 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 IL1RL1Q01638 556 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 SEC23BQ15437 767 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 TAB1Q15750 504 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 SFRP5Q5T4F7 317 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 C20orf204Q6ZNR8 217 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 OAFQ86UD1 273 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 ZNF100Q8IYN0 542 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 LRRC17Q8N6Y2 441 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 ZIC4Q8N9L1 334 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 OR4C15Q8NGM1 316 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 AKAP1Q92667 903 aaKnown RBP eCLIP13.78□□□□□ -0.2
USB1-208ENST00000563207 SLCO4A1Q96BD0 722 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 NDEL1Q9GZM8 345 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 TAS2R5Q9NYW4 299 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 DNAJB9Q9UBS3 223 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 RCE1Q9Y256 329 aa13.78□□□□□ -0.2
USB1-208ENST00000563207 NPIPB13A6NJU9 1138 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 NPIPB4C9JG80 1138 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 BLOC1S5-TXNDC5H3BN57 136 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 HS3ST1O14792 307 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 CLOCKO15516 846 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 RNF13O43567 381 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 LYZL6O75951 148 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 HEXAP06865 529 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 MAKP20794 623 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 NTF4P34130 210 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 RPS4XP62701 263 aaKnown RBP13.77□□□□□ -0.21
USB1-208ENST00000563207 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.211e-9■■■■■ 34.8
USB1-208ENST00000563207 MICAQ29983 383 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 USF3Q68DE3 2245 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 C1orf94Q6P1W5 598 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 ZFP1Q6P2D0 407 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 AAED1Q7RTV5 226 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 EPHX4Q8IUS5 362 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 APH1AQ96BI3 265 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 ADAD1Q96M93 576 aaKnown RBP13.77□□□□□ -0.21
USB1-208ENST00000563207 GSX2Q9BZM3 304 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 LAMP3Q9UQV4 416 aa13.77□□□□□ -0.21
USB1-208ENST00000563207 ARRDC5A6NEK1 342 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 DPRXA6NFQ7 191 aa13.76□□□□□ -0.21
USB1-208ENST00000563207 TRAF3IP2O43734 574 aaPredicted RBP13.76□□□□□ -0.21
USB1-208ENST00000563207 CCNB2O95067 398 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms