RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CELSR3Q9NYQ7 3312 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 MGAQ8IWI9 3026 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 TCRBV3S1A0A5B6 114 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 RIIAD1A6NNX1 92 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 IDH3BO43837 385 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 AHCYL1O43865 530 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 TMCC2O75069 709 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 RAB36O95755 333 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 CLDN1O95832 211 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 CGAP01215 116 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 HLA-DQA2P01906 255 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 THY1P04216 161 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 QDPRP09417 244 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 CD79AP11912 226 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 NPR2P20594 1047 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 MAKP20794 623 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 CRABP1P29762 137 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 MAGEA2P43356 314 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 HMGA2P52926 109 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 ERVK-25P63136 954 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 LTBQ06643 244 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 MELKQ14680 651 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 KPNB1Q14974 876 aaKnown RBP9.47□□□□□ -0.89
TPM1-229ENST00000561242 SGCAQ16586 387 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 CEACAM16Q2WEN9 425 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 RFX4Q33E94 735 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 BEX5Q5H9J7 111 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 TIMM23BQ5SRD1 257 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 TMEM53Q6P2H8 277 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 TMEM108Q6UXF1 575 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 UNQ6126/PRO20091Q6UXV3 157 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 ZNF813Q6ZN06 617 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 ASRGL1Q7L266 308 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 DPPA2Q7Z7J5 298 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 C20orf196Q8IYI0 205 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 SYT14Q8NB59 555 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 C1orf162Q8NEQ5 155 aaPredicted RBP9.47□□□□□ -0.89
TPM1-229ENST00000561242 OR10H5Q8NGA6 315 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 S100PBPQ96BU1 408 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 SLC38A2Q96QD8 506 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 OR2M2Q96R28 347 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 ALG12Q9BV10 488 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 KATNB1Q9BVA0 655 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 OSBPL10Q9BXB5 764 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 VCXQ9H320 206 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 SLC7A10Q9NS82 523 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 ARMC1Q9NVT9 282 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 JKAMPQ9P055 326 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 FBXL3Q9UKT7 428 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 ZNF346Q9UL40 294 aaKnown RBP9.47□□□□□ -0.89
TPM1-229ENST00000561242 IER3IP1Q9Y5U9 82 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 LYVE1Q9Y5Y7 322 aa9.47□□□□□ -0.89
TPM1-229ENST00000561242 ZNF814B7Z6K7 855 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 IMPA2O14732 288 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 RAMP1O60894 148 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 LYPD3O95274 346 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 HMGN1P05114 100 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 CD3EP07766 207 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 OR8G3PP0DMU2 310 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 BMP4P12644 408 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 ACTR3P61158 418 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 PCBD1P61457 104 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 TLE4Q04727 773 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 SRSF1Q07955 248 aaKnown RBP eCLIP9.46□□□□□ -0.9
TPM1-229ENST00000561242 SLC36A2Q495M3 483 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 SLC36A3Q495N2 470 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 C1orf94Q6P1W5 598 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 STAC2Q6ZMT1 411 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 SLC46A3Q7Z3Q1 461 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 ADCK1Q86TW2 530 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 IGFN1Q86VF2 1251 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 ALDH16A1Q8IZ83 802 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 ZNF433Q8N7K0 673 aaPredicted RBP9.46□□□□□ -0.9
TPM1-229ENST00000561242 ARIH2OSQ8N7S6 290 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 OR2T33Q8NG76 320 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 OR52N5Q8NH56 324 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 MOSPD2Q8NHP6 518 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 NSMAFQ92636 917 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 PIK3IP1Q96FE7 263 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 CENPNQ96H22 339 aaPredicted RBP9.46□□□□□ -0.9
TPM1-229ENST00000561242 TXNDC15Q96J42 360 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 RADILQ96JH8 1075 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 DHRS1Q96LJ7 313 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 WFIKKN1Q96NZ8 548 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 ALKBH3Q96Q83 286 aaPredicted RBP9.46□□□□□ -0.9
TPM1-229ENST00000561242 TSSK6Q9BXA6 273 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 OR52D1Q9H346 318 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 DENND2DQ9H6A0 471 aaPredicted RBP9.46□□□□□ -0.9
TPM1-229ENST00000561242 GPR35Q9HC97 309 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 KRT84Q9NSB2 600 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 SEC14L4Q9UDX3 406 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 MALT1Q9UDY8 824 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 KLHL21Q9UJP4 597 aa9.46□□□□□ -0.9
TPM1-229ENST00000561242 IQCMA0A1B0GVH7 501 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 A0A1W2PPL8 197 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 NPIPB13A6NJU9 1138 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 OR5H1A6NKK0 313 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 ZNF99A8MXY4 864 aaPredicted RBP9.45□□□□□ -0.9
TPM1-229ENST00000561242 NPIPB4C9JG80 1138 aa9.45□□□□□ -0.9
TPM1-229ENST00000561242 M0R1B8 84 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms