RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PODNL1Q6PEZ8 512 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 CYP2R1Q6VVX0 501 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 CYP4Z1Q86W10 505 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 LRRC75AQ8NAA5 344 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 TMEM54Q969K7 222 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 MBD6Q96DN6 1003 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 CLPTM1LQ96KA5 538 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 PIP5K1AQ99755 562 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 CRLF2Q9HC73 371 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 HIF3AQ9Y2N7 669 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 AMDHD2Q9Y303 409 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 ARID1AO14497 2285 aa13.36□□□□□ -0.27
SNRPA1-213ENST00000560856 TRBV4-1A0A0J9YWV2 114 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 ZNF726A6NNF4 738 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 M0R3G1 203 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 CDC42EP2O14613 210 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 RAF1P04049 648 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 F13BP05160 661 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 CD3EP07766 207 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 RUNX1T1Q06455 604 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 TRIM25Q14258 630 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 MELKQ14680 651 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 SEC23BQ15437 767 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 LCN8Q6JVE9 175 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 ANKRD16Q6P6B7 361 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 LRFN4Q6PJG9 635 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 ZNF730Q6ZMV8 503 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 TMPRSS11FQ6ZWK6 438 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 ZNF627Q7L945 461 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 NEUROG1Q92886 237 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 SLC25A44Q96H78 314 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 ADAD1Q96M93 576 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 SEPHS2Q99611 448 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 C1QTNF6Q9BXI9 259 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 MRPL13Q9BYD1 178 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 CXXC4Q9H2H0 198 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 ESRP2Q9H6T0 727 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 UBTD1Q9HAC8 227 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 IL1RAPQ9NPH3 570 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 INIPQ9NRY2 104 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 ITGB1BP2Q9UKP3 347 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 FAM32AQ9Y421 112 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 RNF115Q9Y4L5 304 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 USF3Q68DE3 2245 aa13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 MAP1AP78559 2803 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-213ENST00000560856 HEATR1Q9H583 2144 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 A0A096LPE4 126 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 ARPC4-TTLL3A0A0A6YYG9 625 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 A0A1W2PPZ6 126 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 NPIPB13A6NJU9 1138 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 SHISA9B4DS77 424 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 NPIPB4C9JG80 1138 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 ACOT8O14734 319 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 HS3ST1O14792 307 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 CLOCKO15516 846 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 BCL10O95999 233 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 PGA4P0DJD7 388 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 PGA3P0DJD8 388 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 HOXB1P14653 301 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 ZNF26P17031 533 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 DNASE1P24855 282 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 CD40P25942 277 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 LIMS1P48059 325 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 ZNF83P51522 516 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 PRPS1P60891 318 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 HIST3H3Q16695 136 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 ARMC4Q5T2S8 1044 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 PIWIL3Q7Z3Z3 882 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 ASB10Q8WXI3 467 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 TNFRSF13CQ96RJ3 184 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 MUC13Q9H3R2 512 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 OBP2BQ9NPH6 170 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 GLTPQ9NZD2 209 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 F8P00451 2351 aa13.34□□□□□ -0.27
SNRPA1-213ENST00000560856 HIVEP1P15822 2718 aa13.33□□□□□ -0.27
SNRPA1-213ENST00000560856 CELSR1Q9NYQ6 3014 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 ITPR3Q14573 2671 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 TRAV27A0A087WT01 109 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF503-AS2A6NEH8 195 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF99A8MXY4 864 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 EFCAB9A8MZ26 197 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 PTP4A3O75365 173 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 ITGA2P17301 1181 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 PTAFRP25105 342 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 MAGEA2P43356 314 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 GPR4P46093 362 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 OMPP47874 163 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 CSNK1A1P48729 337 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 SLC9A3P48764 834 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 KEAP1Q14145 624 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 ANKDD1AQ495B1 522 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 MTX3Q5HYI7 312 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 C20orf204Q6ZNR8 217 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 DHFR2Q86XF0 187 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 KBTBD8Q8NFY9 601 aa13.33□□□□□ -0.28
SNRPA1-213ENST00000560856 OR13C2Q8NGS9 318 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms