RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SOX6P35712 828 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 RPS19P39019 145 aaKnown RBP11.59□□□□□ -0.55
SNX1-211ENST00000560829 DAP3P51398 398 aaKnown RBP11.59□□□□□ -0.55
SNX1-211ENST00000560829 BLVRAP53004 296 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 HCCSP53701 268 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 RAP1BP61224 184 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 RAP1AP62834 184 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 FOXK1P85037 733 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 TLE3Q04726 772 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 TBC1D25Q3MII6 688 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 GLYR1Q49A26 553 aaPredicted RBP11.59□□□□□ -0.55
SNX1-211ENST00000560829 ZNF684Q5T5D7 378 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 C22orf42Q6IC83 251 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 LYPD4Q6UWN0 246 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 NHLRC1Q6VVB1 395 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 PM20D2Q8IYS1 436 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 THAP4Q8WY91 577 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 THOC3Q96J01 351 aaKnown RBP11.59□□□□□ -0.55
SNX1-211ENST00000560829 GNRHR2Q96P88 292 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 LRFN3Q9BTN0 628 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 NUAK2Q9H093 628 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 HMG20AQ9NP66 347 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 PALMDQ9NP74 551 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 FAM86C1Q9NVL1 165 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 TRAPPC4Q9Y296 219 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 RPH3AQ9Y2J0 694 aaPredicted RBP11.59□□□□□ -0.55
SNX1-211ENST00000560829 SDK2Q58EX2 2172 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 A0A075B6Q4 140 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 SLC22A23A1A5C7 686 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 FAM171A2A8MVW0 826 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 E9PI62 339 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 J3QLW9 94 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 ZIC3O60481 467 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 CD1AP06126 327 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 ZNF19P17023 458 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 CYB561P49447 251 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 P2RY4P51582 365 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 GABREP78334 506 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 ZNF846Q147U1 533 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 TRAM1Q15629 374 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 DCAF10Q5QP82 559 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 DMKNQ6E0U4 476 aaPredicted RBP11.59□□□□□ -0.55
SNX1-211ENST00000560829 CDC20BQ86Y33 519 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 BEST3Q8N1M1 668 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 MFSD4AQ8N468 514 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 ZNF511Q8NB15 262 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 OR5M1Q8NGP8 315 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 ASB10Q8WXI3 467 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 MIB2Q96AX9 1013 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 PELI1Q96FA3 418 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 WDR12Q9GZL7 423 aaKnown RBP11.59□□□□□ -0.55
SNX1-211ENST00000560829 B3GAT1Q9P2W7 334 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 IL17BQ9UHF5 180 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 TEKT2Q9UIF3 430 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 ST6GALNAC2Q9UJ37 374 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 B9D1Q9UPM9 204 aa11.59□□□□□ -0.55
SNX1-211ENST00000560829 IGLV1-36A0A0B4J1U3 117 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 GABRPO00591 440 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 OGG1O15527 345 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 SEC14L5O43304 696 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 HSF1Q00613 529 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 C19orf57Q0VDD7 668 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 CCDC58Q4VC31 144 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 IGF2-ASQ6U949 168 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 KCTD20Q7Z5Y7 419 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 SNX33Q8WV41 574 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 SLC25A46Q96AG3 418 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 PGLYRP3Q96LB9 341 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 C5orf34Q96MH7 638 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 UBL7Q96S82 380 aaPredicted RBP11.58□□□□□ -0.56
SNX1-211ENST00000560829 DCLRE1CQ96SD1 692 aaKnown RBP11.58□□□□□ -0.56
SNX1-211ENST00000560829 TMED9Q9BVK6 235 aa11.58□□□□□ -0.56
SNX1-211ENST00000560829 LOC102725191A0A1B0GVB3 256 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 NPIPA5E9PKD4 350 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 AKR7A3O95154 331 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 PMS2P2O95744 297 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 IFNGR1P15260 489 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 SHC1P29353 583 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 CRABP1P29762 137 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 SRD5A2P31213 254 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 RORCP51449 518 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 GBX2P52951 348 aaPredicted RBP11.57□□□□□ -0.56
SNX1-211ENST00000560829 AIMP2Q13155 320 aaKnown RBP11.57□□□□□ -0.56
SNX1-211ENST00000560829 MELKQ14680 651 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 TP53I3Q53FA7 332 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 TMEM91Q6ZNR0 172 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 TMPPEQ6ZT21 453 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 SLC35D2Q76EJ3 337 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 KDM8Q8N371 416 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 IL22RA1Q8N6P7 574 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 HAVCR2Q8TDQ0 301 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 OR5B2Q96R09 309 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 INTS14Q96SY0 518 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 KCNK17Q96T54 332 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 HDHD5Q9BXW7 423 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 BARHL1Q9BZE3 327 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 WDR76Q9H967 626 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 ANKRD10Q9NXR5 420 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 GALNT8Q9NY28 637 aa11.57□□□□□ -0.56
SNX1-211ENST00000560829 STMN3Q9NZ72 180 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms