RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CLPTM1O96005 669 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 TFPTP0C1Z6 253 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 PNMTP11086 282 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 ZNF43P17038 809 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 EPHA3P29320 983 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 GALK2Q01415 458 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 NKPD1Q17RQ9 610 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 SMU1Q2TAY7 513 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 ARMCX4Q5H9R4 360 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 MRPL2Q5T653 305 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 SAXO2Q658L1 398 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 OR4F3Q6IEY1 312 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 OGFOD2Q6N063 350 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 RHOUQ7L0Q8 258 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 ZNF771Q7L3S4 317 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 RETREG3Q86VR2 466 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 TREML1Q86YW5 311 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 ANKFN1Q8N957 763 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 WFDC12Q8WWY7 111 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 TEX37Q96LM6 180 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 OR52B2Q96RD2 323 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 SLC38A1Q9H2H9 487 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 HINT3Q9NQE9 182 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 TAAR3PQ9P1P4 343 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 SEC14L4Q9UDX3 406 aa10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 LEF1Q9UJU2 399 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-213ENST00000560127 TENM3Q9P273 2699 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 PPIAL4EA0A075B759 164 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 PPIAL4CA0A0B4J2A2 164 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 IGHV1-69-2A0A0G2JMI3 117 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 CLDN25C9JDP6 229 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 PPIAL4DF5H284 164 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 HDAC3O15379 428 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 TRAF3IP2O43734 574 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 C1QCP02747 245 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 GKN3PP0CG01 181 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 PPIAL4FP0DN26 164 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 KITP10721 976 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 UQCRBP14927 111 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 RPS4Y1P22090 263 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 IL12AP29459 219 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 ACAA2P42765 397 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 PTDSS1P48651 473 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 ATP4BP51164 291 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 CLDN8P56748 225 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 HPCAP84074 193 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 SYPL1Q16563 259 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 PCGF3Q3KNV8 242 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 TMEM154Q6P9G4 183 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 USP51Q70EK9 711 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 C1QL4Q86Z23 238 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 TMEM123Q8N131 208 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 OR4A15Q8NGL6 344 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 OR2M2Q96R28 347 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 CCT8L2Q96SF2 557 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 PTDSS2Q9BVG9 487 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 MMP26Q9NRE1 261 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 RLIMQ9NVW2 624 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 NKIRAS2Q9NYR9 191 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 NOP53Q9NZM5 478 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 SLC7A8Q9UHI5 535 aa10.87□□□□□ -0.67
RABGGTA-213ENST00000560127 IGLV3-9A0A075B6K5 115 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 M0R3G1 203 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 HMGN4O00479 90 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 RNASET2O00584 256 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 LBPP18428 481 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 UQCRC2P22695 453 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 GIPRP48546 466 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 AQP5P55064 265 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 TEKQ02763 1124 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 ATG16L1Q676U5 607 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 WBP2NLQ6ICG8 309 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 RGS7BPQ6MZT1 257 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 ZNF813Q6ZN06 617 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 ANKRD46Q86W74 232 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 ZNF584Q8IVC4 421 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 LRRC34Q8IZ02 419 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 CADM2Q8N3J6 435 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 PIK3C3Q8NEB9 887 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 MFSD8Q8NHS3 518 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 GTF3AQ92664 365 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 RAB1CQ92928 201 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 SLC25A36Q96CQ1 311 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 NEURL3Q96EH8 262 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 C7orf26Q96N11 449 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 OXGR1Q96P68 337 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 TRNT1Q96Q11 434 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 CITED1Q99966 193 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 GAL3ST1Q99999 423 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 AIG1Q9NVV5 245 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 GPR45Q9Y5Y3 372 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 SOX21Q9Y651 276 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 COL7A1Q02388 2944 aa10.86□□□□□ -0.67
RABGGTA-213ENST00000560127 CDHR4A6H8M9 788 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 M0QZ24 198 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 KNG1P01042 644 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 B4GALT1P15291 398 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 ZNF250P15622 560 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 IL7RP16871 459 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms