RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SMNDC1O75940 238 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMG20A-209ENST00000559728 HIST1H2ABP04908 130 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ITGA5P08648 1049 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 SAGP10523 405 aaPredicted RBP7.97□□□□□ -1.13
HMG20A-209ENST00000559728 COX5AP20674 150 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 IGHV1-2P23083 117 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 PCYT1AP49585 367 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ASCL1P50553 236 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 DAPP51397 102 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 BIDP55957 195 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ELF3P78545 371 aaPredicted RBP7.97□□□□□ -1.13
HMG20A-209ENST00000559728 FAM27E3Q08E93 113 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 MELKQ14680 651 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 RFX4Q33E94 735 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ANKDD1AQ495B1 522 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ALG10Q5BKT4 473 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ZNF362Q5T0B9 420 aaPredicted RBP7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ZFP1Q6P2D0 407 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 NIPAL3Q6P499 406 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 KLHL17Q6TDP4 642 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 CASP12Q6UXS9 341 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 STAC2Q6ZMT1 411 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 RASSF6Q6ZTQ3 369 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 SLC35D2Q76EJ3 337 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 HIST3H2AQ7L7L0 130 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 RRM2BQ7LG56 351 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 UEVLDQ8IX04 471 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 C20orf196Q8IYI0 205 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 LINC00471Q8N535 108 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 OR6X1Q8NH79 312 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 OR5K1Q8NHB7 308 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 GIPC3Q8TF64 312 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ASB10Q8WXI3 467 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 HIST1H2ACQ93077 130 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 TMEM54Q969K7 222 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 APH1AQ96BI3 265 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 NRBF2Q96F24 287 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 LINC00470Q9BZP3 86 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 GABARAPL1Q9H0R8 117 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 SEMA6AQ9H2E6 1030 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 OR52D1Q9H346 318 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 TXNIPQ9H3M7 391 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 YY1AP1Q9H869 796 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 INIPQ9NRY2 104 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 GALNT8Q9NY28 637 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 IL20Q9NYY1 176 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 C6orf203Q9P0P8 240 aaPredicted RBP7.97□□□□□ -1.13
HMG20A-209ENST00000559728 MGAT4BQ9UQ53 548 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 ADAM18Q9Y3Q7 739 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 KLF2Q9Y5W3 355 aaPredicted RBP7.97□□□□□ -1.13
HMG20A-209ENST00000559728 DOCK7Q96N67 2140 aa7.97□□□□□ -1.13
HMG20A-209ENST00000559728 MED12LQ86YW9 2145 aa7.96□□□□□ -1.13
HMG20A-209ENST00000559728 IGKV1D-43A0A0B4J1Z2 117 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 A1L4Q6 167 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 RPL36A-HNRNPH2H7BZ11 118 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 BHLHE40O14503 412 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 GNGT2O14610 69 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 TRMUO75648 421 aaKnown RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 SERPINI2O75830 405 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 NDUFB2O95178 105 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 CNOT4O95628 575 aaKnown RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 TXNDC12O95881 172 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 ADAP00813 363 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 CD14P08571 375 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 PGA4P0DJD7 388 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 PGA3P0DJD8 388 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 CD79BP40259 229 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 ZNF133P52736 654 aaPredicted RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 CTXN1P60606 82 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 PRPS1P60891 318 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 ERVK-25P63136 954 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 PPP2R2BQ00005 443 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 DBPQ10586 325 aaPredicted RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 POU4F2Q12837 409 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 SNTB1Q13884 538 aaKnown RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 C1DQ13901 141 aaKnown RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 TSC22D1Q15714 1073 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 MESTQ5EB52 335 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 FBXW9Q5XUX1 488 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 LRFN4Q6PJG9 635 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 SMARCD3Q6STE5 483 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 SEZ6L2Q6UXD5 910 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 Q6ZT83 130 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 CDK20Q8IZL9 346 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 CLDN22Q8N7P3 220 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 OR4Q3Q8NH05 313 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 FANK1Q8TC84 345 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 HDAC2Q92769 488 aaKnown RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 RNASE6Q93091 150 aaKnown RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 GTPBP3Q969Y2 492 aaKnown RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 CENPNQ96H22 339 aaPredicted RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 SAMD8Q96LT4 415 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 Q96M85 177 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 DDOQ99489 341 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 KATNB1Q9BVA0 655 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 RBM24Q9BX46 236 aaKnown RBP7.96□□□□□ -1.14
HMG20A-209ENST00000559728 SLCO5A1Q9H2Y9 848 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 NELFAQ9H3P2 528 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 SMURF2Q9HAU4 748 aa7.96□□□□□ -1.14
HMG20A-209ENST00000559728 KCNJ16Q9NPI9 418 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms