RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SLC17A5Q9NRA2 495 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 NPAP1Q9NZP6 1156 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 TMEM5Q9Y2B1 443 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 ABCA12Q86UK0 2595 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 HRNRQ86YZ3 2850 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 ITPR2Q14571 2701 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 M0R1B8 84 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 CDC42EP2O14613 210 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 PLAUP00749 431 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 LOXP28300 417 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 DAP3P51398 398 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 NR1H2P55055 460 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 CLRN1P58418 232 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 SMIM11AP58511 58 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 TUBA1BP68363 451 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 TUBA4AP68366 448 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 ARF1P84077 181 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 CHRNB3Q05901 458 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 BSPH1Q075Z2 132 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 FLOT2Q14254 428 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 ACKR1Q16570 336 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 FAM98BQ52LJ0 330 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 SEZ6L2Q6UXD5 910 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 TUBA1AQ71U36 451 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 C17orf78Q8N4C9 275 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 OR6X1Q8NH79 312 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 ZNF566Q969W8 418 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 DHRS1Q96LJ7 313 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 TNFRSF13CQ96RJ3 184 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 ZNF347Q96SE7 839 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 KRCC1Q9NPI7 259 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 ITGB1BP2Q9UKP3 347 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 AURKCQ9UQB9 309 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 PLEKHA6Q9Y2H5 1048 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 HIF3AQ9Y2N7 669 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 AMDHD2Q9Y303 409 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 SLC25A15Q9Y619 301 aa13.9□□□□□ -0.18
RABGGTA-206ENST00000558649 SH3PXD2BA1X283 911 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 HTR3EA5X5Y0 456 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 ACOT8O14734 319 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 RPL4P36578 427 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 CAPZA2P47755 286 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 SLC9A3P48764 834 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 ERFP50548 548 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 SH3BGRP55822 239 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 UBE2NP61088 152 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 RPS4XP62701 263 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 MYBPC1Q00872 1141 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 TBRG1Q3YBR2 411 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 NCMAPQ5T1S8 102 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 ANKRD16Q6P6B7 361 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 ZNF704Q6ZNC4 412 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 WDR31Q8NA23 367 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 SYT14Q8NB59 555 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 ASB10Q8WXI3 467 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 SLC25A44Q96H78 314 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 LRR1Q96L50 414 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 ALPK1Q96QP1 1244 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 CADM1Q9BY67 442 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 PLEKHF2Q9H8W4 249 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 RNF115Q9Y4L5 304 aa13.89□□□□□ -0.19
RABGGTA-206ENST00000558649 ZNF99A8MXY4 864 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 RPL36A-HNRNPH2H7BZ11 118 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 GSC2O15499 205 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 OR10H3O60404 316 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 WNT11O96014 354 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 IGHG1P01857 330 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 CD3EP07766 207 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 TSPAN19P0C672 248 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 PGA4P0DJD7 388 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 PGA3P0DJD8 388 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 OMPP47874 163 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 RASSF2P50749 326 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 CTXN1P60606 82 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 PRPS1P60891 318 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 RUNX1T1Q06455 604 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 TRAP1Q12931 704 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 ZBED5Q49AG3 693 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 ADAM5Q6NVV9 412 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 KLHL17Q6TDP4 642 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 TMPRSS11FQ6ZWK6 438 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 PIWIL3Q7Z3Z3 882 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 HDDC2Q7Z4H3 204 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 SPATA24Q86W54 205 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 NOXO1Q8NFA2 376 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 BCL2L2Q92843 193 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 TMEM54Q969K7 222 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 RSRC1Q96IZ7 334 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 FUZQ9BT04 418 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 MAGIXQ9H6Y5 334 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 CCM2LQ9NUG4 571 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 GLTPQ9NZD2 209 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 ST6GALNAC2Q9UJ37 374 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 POFUT2Q9Y2G5 429 aa13.88□□□□□ -0.19
RABGGTA-206ENST00000558649 DPRXA6NFQ7 191 aa13.87□□□□□ -0.19
RABGGTA-206ENST00000558649 UNC119BA6NIH7 251 aa13.87□□□□□ -0.19
RABGGTA-206ENST00000558649 TNFRSF11BO00300 401 aa13.87□□□□□ -0.19
RABGGTA-206ENST00000558649 ABCD4O14678 606 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms