RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PUS1Q9Y606 427 aaKnown RBP eCLIP2.17□□□□□ -2.06
SPG11-206ENST00000558093 ANKRD30BQ9BXX2 1392 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 MAPK8IP3Q9UPT6 1336 aa2.17□□□□□ -2.06
SPG11-206ENST00000558093 ARID1AO14497 2285 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 INSRP06213 1382 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 KANK1Q14678 1352 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 IGHV7-81A0A0B4J1V7 117 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 RAB19A4D1S5 217 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 MBLAC1A4D2B0 266 aaPredicted RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 METTL21EPA6NDL7 271 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 TUBAL3A6NHL2 446 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 ANKRD30BLA7E2S9 258 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 WASH3PC4AMC7 463 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 H0YJX3 145 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 H0YL77 283 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 TOR1AO14656 332 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 KDELR3O43731 214 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 UPK3AO75631 287 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 NSA2O95478 260 aaKnown RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 SNAI1O95863 264 aaPredicted RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 RRASP10301 218 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 H2AFXP16104 143 aaPredicted RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 MX1P20591 662 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 CCNOP22674 350 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 PRDX2P32119 198 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 PTGFRP43088 359 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 ARRB1P49407 418 aaPredicted RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 TPMTP51580 245 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 ATP5J2P56134 94 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 RGS8P57771 180 aaPredicted RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 UBE2G2P60604 165 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 FGL1Q08830 312 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 FUT7Q11130 342 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 ZNF154Q13106 437 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 STX5Q13190 355 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 DGCR6Q14129 220 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 SELPLGQ14242 412 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 TRIP10Q15642 601 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 MPPED2Q15777 294 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 ZSWIM7Q19AV6 140 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 SLC5A12Q1EHB4 618 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 EXOC3L2Q2M3D2 409 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 DNAL1Q4LDG9 190 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 TMIGD1Q6UXZ0 262 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 C16orf62Q7Z3J2 963 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 VSTM4Q8IW00 320 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 LRRC75A-AS1Q8N1F1 130 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 OR4D6Q8NGJ1 314 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 RAD51AP1Q96B01 352 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 CERS2Q96G23 380 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 DUS3LQ96G46 650 aaKnown RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 CIB1Q99828 191 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 NMNAT2Q9BZQ4 307 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 DRC3Q9H069 523 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 OR52A5Q9H2C5 316 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 GOLPH3Q9H4A6 298 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 NARFLQ9H6Q4 476 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 KAT8Q9H7Z6 458 aaKnown RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 SGK2Q9HBY8 427 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 ZNF302Q9NR11 478 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 RBAKQ9NYW8 714 aaPredicted RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 RNF14Q9UBS8 474 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 SLC7A8Q9UHI5 535 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 ADAM28Q9UKQ2 775 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 VANGL2Q9ULK5 521 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 SAMD4AQ9UPU9 718 aaKnown RBP2.16□□□□□ -2.06
SPG11-206ENST00000558093 POFUT2Q9Y2G5 429 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 SCRIBQ14160 1630 aa2.16□□□□□ -2.06
SPG11-206ENST00000558093 NEURL4Q96JN8 1562 aa2.15□□□□□ -2.06
SPG11-206ENST00000558093 IGLV3-16A0A075B6K0 115 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 TRAV26-1A0A087WT03 109 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 A0A1B0GUH1 482 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 A0A1B0GW15 77 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 WASHC1A8K0Z3 465 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 SMLR1H3BR10 107 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 PGRMC1O00264 195 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 SDHDO14521 159 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 ITGB1BP1O14713 200 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 ARPC3O15145 178 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 STX11O75558 287 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CIAO1O76071 339 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 NDUFA7O95182 113 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 RAB3DO95716 219 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 NDUFB10O96000 172 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 IFNA14P01570 189 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 FTH1P02794 183 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 IL6P05231 212 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 ANXA4P09525 319 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 PNMA6AP0CW24 399 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 ZNF44P15621 663 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 NCK1P16333 377 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CTRB1P17538 263 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 MAGP20916 626 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CCNE1P24864 410 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 PSMA2P25787 234 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 G0S2P27469 103 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 PSMB6P28072 239 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 HNRNPH3P31942 346 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 CDKN2CP42773 168 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CSNK1DP48730 415 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms