RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CTRB2Q6GPI1 263 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 OR5M10Q6IEU7 315 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 UFSP1Q6NVU6 142 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 TMPRSS11AQ6ZMR5 421 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 TMUB2Q71RG4 321 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ARCQ7LC44 396 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 BHLHA9Q7RTU4 235 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 C1QL2Q7Z5L3 287 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ADGRA3Q8IWK6 1321 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 C9orf40Q8IXQ3 194 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 SLC16A11Q8NCK7 471 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ZNF502Q8TBZ5 544 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 CMTM7Q96FZ5 175 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 LZTS2Q9BRK4 669 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 HIPK2Q9H2X6 1198 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 KIR3DX1Q9H7L2 352 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 SIAEQ9HAT2 523 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 BEX1Q9HBH7 125 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 PRSS16Q9NQE7 514 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 FANCIQ9NVI1 1328 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 KCNIP1Q9NZI2 227 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 THAP10Q9P2Z0 257 aaPredicted RBP3.06□□□□□ -1.92
TDP1-217ENST00000557782 RSPH14Q9UHP6 348 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 LGALS13Q9UHV8 139 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ENPP5Q9UJA9 477 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 MMP17Q9ULZ9 603 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 GOLT1BQ9Y3E0 138 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ATP6V1DQ9Y5K8 247 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 PHF3Q92576 2039 aaKnown RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 CNTNAP1P78357 1384 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 MYO3BQ8WXR4 1341 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 SLC22A20A6NK97 555 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 DHRS7CA6NNS2 312 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 USP27XA6NNY8 438 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 EFCAB7A8K855 629 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 LYRM9A8MSI8 78 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 BMPR1BO00238 502 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 SCAMP2O15127 329 aaKnown RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 MRPS12O15235 138 aaKnown RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 MBTPS2O43462 519 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ENTPD5O75356 428 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 CLDN11O75508 207 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 CRTAPO75718 401 aaPredicted RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 SLC2A10O95528 541 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 RENP00797 406 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 HBE1P02100 147 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 RPN2P04844 631 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 SERPINA5P05154 406 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 IGKV2-30P06310 120 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 KLK1P06870 262 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ACSM4P0C7M7 580 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 TCN1P20061 433 aaPredicted RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 CCKARP32238 428 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 CRATP43155 626 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 KIR2DS2P43631 304 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 THBS3P49746 956 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 BIDP55957 195 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 STXBP1P61764 594 aaKnown RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 GNB1P62873 340 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 SKP1P63208 163 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ECH1Q13011 328 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 MAPRE2Q15555 327 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 GABRA6Q16445 453 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 TRMT5Q32P41 509 aaKnown RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 NSUN5P1Q3KNT7 163 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ZNF718Q3SXZ3 478 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ZNF876PQ49A33 203 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 Q6ZN92 141 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 MBOAT1Q6ZNC8 495 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 DNM1P46Q6ZS02 220 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ACOT7LQ6ZUV0 252 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 GPRIN3Q6ZVF9 776 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 OR2W3Q7Z3T1 314 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 SLC22A18ASQ8N1D0 253 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 SYS1Q8N2H4 156 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 SNX31Q8N9S9 440 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 NUBPLQ8TB37 319 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ANP32BQ92688 251 aaKnown RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 SMARCD2Q92925 531 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 NEIL2Q969S2 332 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 C8orf76Q96K31 380 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 F2RL3Q96RI0 385 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 KLHDC3Q9BQ90 382 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 CHID1Q9BWS9 393 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 MAP1LC3CQ9BXW4 147 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ACTR6Q9GZN1 396 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 PATZ1Q9HBE1 687 aaKnown RBP3.05□□□□□ -1.92
TDP1-217ENST00000557782 LY9Q9HBG7 655 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ANKHQ9HCJ1 492 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 AGPAT4Q9NRZ5 378 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 MCUBQ9NWR8 336 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 WWOXQ9NZC7 414 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 DCDC2Q9UHG0 476 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ING4Q9UNL4 249 aa3.05□□□□□ -1.92
TDP1-217ENST00000557782 ANKRD30BQ9BXX2 1392 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 IGHV1OR21-1A0A087WYE8 117 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 GLYATL1P3A0A0U1RQE8 302 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 A0A1B0GW15 77 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 A0A1W2PQ72 361 aa3.04□□□□□ -1.92
TDP1-217ENST00000557782 MEX3AA1L020 520 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms