RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 TMEM255BQ8WV15 326 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 AKAP1Q92667 903 aaKnown RBP eCLIP6.89□□□□□ -1.31
PSEN1-222ENST00000557356 RBP7Q96R05 134 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 CCL19Q99731 98 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 ULBP2Q9BZM5 246 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 GRIP2Q9C0E4 1043 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 CXXC4Q9H2H0 198 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 KCNN2Q9H2S1 579 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 CRLF2Q9HC73 371 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 GPR35Q9HC97 309 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 CISD1Q9NZ45 108 aaKnown RBP6.89□□□□□ -1.31
PSEN1-222ENST00000557356 GLTPQ9NZD2 209 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 ACTR3BQ9P1U1 418 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 POU2F3Q9UKI9 436 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 PLEKHA6Q9Y2H5 1048 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 MPDZO75970 2070 aa6.89□□□□□ -1.31
PSEN1-222ENST00000557356 UNC79Q9P2D8 2635 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 A0A087WUU8 490 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 DPRXA6NFQ7 191 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 EFCAB9A8MZ26 197 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 LRRN3E7EW58 273 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 M0R1B8 84 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 M0R3G1 203 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ABCD4O14678 606 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ARPC2O15144 300 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 SIAH2O43255 324 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 AHCYL1O43865 530 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 SERPINI2O75830 405 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ATP5HO75947 161 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 HPRP00739 348 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 PTHP01270 115 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 OR8G3PP0DMU2 310 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ACADSP16219 412 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 LOXP28300 417 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 YAP1P46937 504 aaKnown RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ZNF83P51522 516 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ZNF84P51523 738 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 UGT2B15P54855 530 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 CLRN1P58418 232 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 RPS4XP62701 263 aaKnown RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ARF1P84077 181 aaKnown RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 RPL18Q07020 188 aaKnown RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 CAMK2DQ13557 499 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 TBRG1Q3YBR2 411 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ZNF672Q499Z4 452 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ZBED5Q49AG3 693 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 DNAL1Q4LDG9 190 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ALG10Q5BKT4 473 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 C9orf135Q5VTT2 229 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 AGAP6Q5VW22 663 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 CARD17Q5XLA6 110 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ZNF544Q6NX49 715 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 SLC22A25Q6T423 547 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 SEZ6L2Q6UXD5 910 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 NHLRC1Q6VVB1 395 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 DHFR2Q86XF0 187 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 LRRC17Q8N6Y2 441 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 RNF148Q8N7C7 305 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 RBM15BQ8NDT2 890 aaKnown RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 OR4F15Q8NGB8 312 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 SMAP2Q8WU79 429 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 TXNDC15Q96J42 360 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 C7orf34Q96L11 122 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 LRGUKQ96M69 825 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 ALKBH3Q96Q83 286 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-222ENST00000557356 HS3ST6Q96QI5 342 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 FOXB1Q99853 325 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 EMC6Q9BV81 110 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 KATNB1Q9BVA0 655 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 TRIM15Q9C019 465 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 TXNIPQ9H3M7 391 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 LIME1Q9H400 295 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 SMURF2Q9HAU4 748 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 IL1RAPQ9NPH3 570 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 MED29Q9NX70 200 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 NDUFAF4Q9P032 175 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 SEC14L4Q9UDX3 406 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 TMCC3Q9ULS5 477 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 AURKCQ9UQB9 309 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 HIF3AQ9Y2N7 669 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 SPEF1Q9Y4P9 236 aa6.88□□□□□ -1.31
PSEN1-222ENST00000557356 COL12A1Q99715 3063 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 FFAR1O14842 300 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 GYG2O15488 501 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 DHHO43323 396 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 GADD45GO95257 159 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 F13BP05160 661 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 FABP3P05413 133 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 TSPAN19P0C672 248 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 HLA-DOBP13765 273 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 PAX1P15863 534 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 NPR2P20594 1047 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 RRM2P31350 389 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 AQP2P41181 271 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 NKX6-1P78426 367 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-222ENST00000557356 CHRNB3Q05901 458 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 TRAP1Q12931 704 aaKnown RBP6.87□□□□□ -1.31
PSEN1-222ENST00000557356 FOXD4Q12950 439 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-222ENST00000557356 GK3PQ14409 553 aa6.87□□□□□ -1.31
PSEN1-222ENST00000557356 LAPTM4AQ15012 233 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms