RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 GLRXP35754 106 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 ARR3P36575 388 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 APOBEC1P41238 236 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 ASMTP46597 345 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 CCNG1P51959 295 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 BPIFB3P59826 476 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 TUBA4AP68366 448 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 RAE1P78406 368 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 LCN2P80188 198 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 DLG1Q12959 904 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 CBFBQ13951 182 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 QPRTQ15274 297 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 PCGF3Q3KNV8 242 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 GGTA1PQ4G0N0 100 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 TECRLQ5HYJ1 363 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 CAVIN1Q6NZI2 390 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 CCDC137Q6PK04 289 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM107Q6UX40 140 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 CASP12Q6UXS9 341 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF620Q6ZNG0 422 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 CCDC91Q7Z6B0 441 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM86BQ8N661 226 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 OR1K1Q8NGR3 316 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 C16orf78Q8WTQ4 265 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 SELENOMQ8WWX9 145 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 ST8SIA1Q92185 356 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 RAB1CQ92928 201 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 RPL36ALQ969Q0 106 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM45BQ96B21 275 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 CFAP36Q96G28 342 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 PBKQ96KB5 322 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 AMDHD1Q96NU7 426 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 CPNE1Q99829 537 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 NAA11Q9BSU3 229 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 GATA5Q9BWX5 397 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 MRPL37Q9BZE1 423 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 LAT2Q9GZY6 243 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 IQCGQ9H095 443 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 NOX4Q9NPH5 578 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 NRIP3Q9NQ35 241 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 MMP26Q9NRE1 261 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 FARSBQ9NSD9 589 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 ACER3Q9NUN7 267 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 GIN1Q9NXP7 522 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 LEF1Q9UJU2 399 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF346Q9UL40 294 aaKnown RBP3.96□□□□□ -1.78
SCFD1-223ENST00000557076 SNX6Q9UNH7 406 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 WIPI2Q9Y4P8 454 aa3.96□□□□□ -1.78
SCFD1-223ENST00000557076 PLXNB1O43157 2135 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 GNG14A0A1W2PPG7 69 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 TRAPPC2LH3BP13 241 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 RPL36A-HNRNPH2H7BZ11 118 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 NR5A2O00482 541 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 DNALI1O14645 258 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ANKRD28O15084 1053 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF264O43296 627 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 XPNPEP2O43895 674 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 PIP5K1CO60331 668 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 KRT33AO76009 404 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 MYZAPP0CAP1 466 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF35P13682 527 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF12P17014 697 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 TSPAN8P19075 237 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 IVDP26440 423 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ALDH3B1P43353 468 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ATP12AP54707 1039 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 SH3BGRP55822 239 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 SLC35A1P78382 337 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 C2orf80Q0P641 193 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 MERTKQ12866 999 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 SNTB2Q13425 540 aaKnown RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 DUSP5Q16690 384 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 FAM83EQ2M2I3 478 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 AVPI1Q5T686 147 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 MORN5Q5VZ52 161 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 AP1ARQ63HQ0 302 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ZNF626Q68DY1 528 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 FIP1L1Q6UN15 594 aaKnown RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 AAED1Q7RTV5 226 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 OVCH2Q7RTZ1 564 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 PRR18Q8N4B5 295 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ZSCAN4Q8NAM6 433 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 OR52E2Q8NGJ4 325 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM234Q8WY98 164 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 SGCDQ92629 289 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 DYRK2Q92630 601 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 RAB8BQ92930 207 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ZBTB9Q96C00 473 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 TRIM44Q96DX7 344 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 KTI12Q96EK9 354 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 GIMAP5Q96F15 307 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 AURKBQ96GD4 344 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 TIMD4Q96H15 378 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 FAM71F1Q96KD3 344 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 ALG8Q9BVK2 526 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 CCDC106Q9BWC9 280 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 SF3B5Q9BWJ5 86 aaKnown RBP3.95□□□□□ -1.78
SCFD1-223ENST00000557076 C16orf95Q9H693 158 aa3.95□□□□□ -1.78
SCFD1-223ENST00000557076 NOX3Q9HBY0 568 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms