RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 DOK1Q99704 481 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 NAA11Q9BSU3 229 aaPredicted RBP7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 SF3B5Q9BWJ5 86 aaKnown RBP7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 OR51I1Q9H343 314 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 ASIC5Q9NY37 505 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 UPB1Q9UBR1 384 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 ZDHHC2Q9UIJ5 367 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 MID2Q9UJV3 735 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 OSGIN1Q9UJX0 560 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 PCDHGB4Q9UN71 923 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 SLC9A8Q9Y2E8 581 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 NOX1Q9Y5S8 564 aa7.74□□□□□ -1.17
GTF2A1-204ENST00000556268 TMED7-TICAM2A0A0A6YYA0 188 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 TMEM129A0AVI4 362 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 TMEM72A0PK05 275 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 CLDN24A6NM45 220 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 KLF11O14901 512 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 GPANK1O95872 356 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 IGLV1-44P01699 117 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 IGFBP1P08833 259 aaPredicted RBP7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 OR4A8P0C604 315 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 EGR2P11161 476 aaPredicted RBP7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 HNF1AP20823 631 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 UQCRC2P22695 453 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 RYKP34925 604 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 SERPINB5P36952 375 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 SLC1A3P43003 542 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 P2RY4P51582 365 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 RUNX1T1Q06455 604 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 FUT5Q11128 374 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 ADIPOQQ15848 244 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 GSTA3Q16772 222 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 C9orf135Q5VTT2 229 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 SAXO2Q658L1 398 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 OR4F3Q6IEY1 312 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 CASP12Q6UXS9 341 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 C16orf62Q7Z3J2 963 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 MEX3DQ86XN8 651 aaKnown RBP7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 CLECL1Q8IZS7 167 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 C4orf33Q8N1A6 199 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 ARFGAP2Q8N6H7 521 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 FITM2Q8N6M3 262 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 FNDC5Q8NAU1 212 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 OR9K2Q8NGE7 335 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 ZNF563Q8TA94 476 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 ZNF385AQ96PM9 386 aaKnown RBP7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 C1orf50Q9BV19 199 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 KATNB1Q9BVA0 655 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 BPESC1Q9GZL8 116 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 MTHFD2LQ9H903 347 aaPredicted RBP7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 CHODLQ9H9P2 273 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 CA10Q9NS85 328 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 TMEM45AQ9NWC5 275 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 FBXO9Q9UK97 447 aaPredicted RBP7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 TMED7Q9Y3B3 224 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 WDR45Q9Y484 360 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 FKBP7Q9Y680 259 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 TENM1Q9UKZ4 2725 aa7.73□□□□□ -1.17
GTF2A1-204ENST00000556268 ARPC4-TTLL3A0A0A6YYG9 625 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 RNF103-CHMP3A0A140T963 221 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 LRP5LA4QPB2 252 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 AGAP5A6NIR3 686 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 LIPT2A6NK58 231 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 AP3D1O14617 1153 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 TCF21O43680 179 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 HKR1P10072 659 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 CCNA2P20248 432 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 RPS4Y1P22090 263 aaKnown RBP7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 TACR3P29371 465 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 PPOXP50336 477 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 IDH3GP51553 393 aaPredicted RBP7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 POLR2HP52434 150 aaKnown RBP7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 SNRPD2P62316 118 aaKnown RBP7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 NAAAQ02083 359 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 CASP8Q14790 479 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 PGS1Q32NB8 556 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 IQCCQ4KMZ1 466 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 HIKESHIQ53FT3 197 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 ATAD3BQ5T9A4 648 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 DEF8Q6ZN54 512 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 LINGO2Q7L985 606 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 AAED1Q7RTV5 226 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 ZNF786Q8N393 782 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 TMEM99Q8N816 258 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 NUP37Q8NFH4 326 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 OR4F15Q8NGB8 312 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 OR1K1Q8NGR3 316 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 ZFAND2BQ8WV99 257 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 RAB8BQ92930 207 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 DDIT4LQ96D03 193 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 NEURL3Q96EH8 262 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 DNAJA3Q96EY1 480 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 AURKBQ96GD4 344 aaPredicted RBP7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 MARS2Q96GW9 593 aaKnown RBP7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 SLC35G5Q96KT7 338 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 C16orf45Q96MC5 204 aaPredicted RBP7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 ZIM3Q96PE6 472 aa7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 TRNT1Q96Q11 434 aaKnown RBP7.72□□□□□ -1.17
GTF2A1-204ENST00000556268 SLC38A2Q96QD8 506 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms