RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SLC2A3P11169 496 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 RDXP35241 583 aaKnown RBP1.8□□□□□ -2.12
SCFD1-218ENST00000556256 CSNK1DP48730 415 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 TPMTP51580 245 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 FBXW4P57775 412 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 PLP1P60201 277 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 BST2Q10589 180 aaKnown RBP1.8□□□□□ -2.12
SCFD1-218ENST00000556256 FZD2Q14332 565 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 SGCAQ16586 387 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 RABL6Q3YEC7 729 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-218ENST00000556256 KCTD21Q4G0X4 260 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 LRRC10Q5BKY1 277 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 FRMPD2BQ6IN97 320 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 LRRC31Q6UY01 552 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 UTS2BQ765I0 119 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 CAMK2N1Q7Z7J9 78 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 CDR2LQ86X02 465 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-218ENST00000556256 ZNF557Q8N988 423 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-218ENST00000556256 MDS2Q8NDY4 140 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 OR51G1Q8NGK1 321 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 OR2G3Q8NGZ4 309 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 ACER1Q8TDN7 264 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 SORT1Q99523 831 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 SH3GL1Q99961 368 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 UGT1A7Q9HAW7 530 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 UGT1A10Q9HAW8 530 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 UGT1A8Q9HAW9 530 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 ZFP14Q9HCL3 533 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 DMAP1Q9NPF5 467 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-218ENST00000556256 SLC25A37Q9NYZ2 338 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 SLC7A8Q9UHI5 535 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 HPCAL4Q9UM19 191 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 N6AMT1Q9Y5N5 214 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 WSB1Q9Y6I7 421 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 TRBV6-6A0A0A6YYG2 114 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 IGKV1D-13A0A0B4J2D9 117 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 XKRY2A2RUG3 117 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 A6NDX4 124 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 H0Y8G0 127 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 PES1O00541 588 aaKnown RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 CCL21O00585 134 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 CST1P01037 141 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 IGLV2-23P01705 113 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 ALDOBP05062 364 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 C2P06681 752 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 CRYGBP07316 175 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 GIPP09681 153 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 GKN3PP0CG01 181 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 IGKV1-13P0DP09 117 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 TOP1P11387 765 aaKnown RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 ABOP16442 354 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 ZNF43P17038 809 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 TCN1P20061 433 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 HSD17B2P37059 387 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 GPR6P46095 362 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 TFPI2P48307 235 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 SULT1E1P49888 294 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 ACTR3P61158 418 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 REG3AQ06141 175 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 GUCA2BQ16661 112 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 RSPO1Q2MKA7 263 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 PRAMEF5Q5TYX0 476 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 PRAMEF6Q5VXH4 476 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 Q6ZSR3 168 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 LHFPL3Q86UP9 236 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 THOC6Q86W42 341 aaKnown RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 H1FOOQ8IZA3 346 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 PUSL1Q8N0Z8 303 aaKnown RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 ARIH2OSQ8N7S6 290 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 Q8N9W7 124 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 OR9K2Q8NGE7 335 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 OR1N2Q8NGR9 330 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 MCOLN3Q8TDD5 553 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 GIMAP1Q8WWP7 306 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 FBXO32Q969P5 355 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 IFT74Q96LB3 600 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 KCTD14Q9BQ13 255 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 DNTTIP1Q9H147 329 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 MRPL47Q9HD33 250 aaKnown RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 RBAKQ9NYW8 714 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 STOX2Q9P2F5 926 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 PISDQ9UG56 409 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 NUFIP1Q9UHK0 495 aaKnown RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 F11RQ9Y624 299 aaKnown RBP1.79□□□□□ -2.12
SCFD1-218ENST00000556256 GTF3C1Q12789 2109 aa1.79□□□□□ -2.12
SCFD1-218ENST00000556256 OTOGLQ3ZCN5 2332 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 PDS5BQ9NTI5 1447 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 A0A1B0GVI7 797 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 ZNF726A6NNF4 738 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 ZNF716A6NP11 495 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 PSTPIP1O43586 416 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 MGRN1O60291 552 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 SS18L1O75177 396 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 ZNF735P0CB33 412 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 MCF2P10911 925 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 HPGDP15428 266 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 RPS2P15880 293 aaKnown RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 NCF2P19878 526 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 CCNCP24863 283 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms