RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MED18Q9BUE0 208 aa13.55□□□□□ -0.24
NEK9-209ENST00000556170 NXF2Q9GZY0 626 aaKnown RBP13.55□□□□□ -0.24
NEK9-209ENST00000556170 KCNN3Q9UGI6 736 aa13.55□□□□□ -0.24
NEK9-209ENST00000556170 SHISA3A0PJX4 238 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 GLCEO94923 617 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 RBM34P42696 430 aaKnown RBP13.54□□□□□ -0.24
NEK9-209ENST00000556170 EMP2P54851 167 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 KLHL26Q53HC5 615 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 FAM122CQ6P4D5 195 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 C8orf44Q96CB5 159 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 ABHD1Q96SE0 405 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 PRDM9Q9NQV7 894 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 SERINC1Q9NRX5 453 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 MED11Q9P086 117 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 MLXQ9UH92 298 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 TRAPPC4Q9Y296 219 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 A0A087WUJ7 227 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 A0A1B0GW55 424 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 TRABD2BA6NFA1 517 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 C17orf51A8MQB3 221 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 FOXS1O43638 330 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 DUX4L2P0CJ85 424 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 DUX4L3P0CJ86 424 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 DUX4L4P0CJ87 422 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 DUX4L5P0CJ88 424 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 DUX4L6P0CJ89 424 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 DUX4L7P0CJ90 424 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 RBMS1P29558 406 aaKnown RBP13.54□□□□□ -0.24
NEK9-209ENST00000556170 FNTBP49356 437 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 CCR5P51681 352 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 UBE2IP63279 158 aaKnown RBP13.54□□□□□ -0.24
NEK9-209ENST00000556170 LANCL3Q6ZV70 420 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 OR6N1Q8NGY5 312 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 ZPLD1Q8TCW7 415 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 GIMAP1Q8WWP7 306 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 KCTD12Q96CX2 325 aaKnown RBP13.54□□□□□ -0.24
NEK9-209ENST00000556170 SMIM19Q96E16 107 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 ABRACLQ9P1F3 81 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 DUX4Q9UBX2 424 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 RARRES3Q9UL19 164 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 FLVCR2Q9UPI3 526 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 G3V3Y1 287 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 VAMP1P23763 118 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 CDKN2AP42771 156 aaKnown RBP13.54□□□□□ -0.24
NEK9-209ENST00000556170 CXCL12P48061 93 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 PRAMEF20Q5VT98 475 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 NPSR1Q6W5P4 371 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 FTMTQ8N4E7 242 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 PLPP7Q8NBV4 271 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 OR5M1Q8NGP8 315 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 MR1Q95460 341 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 VSTM2LQ96N03 204 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 WDFY2Q96P53 400 aa13.54□□□□□ -0.24
NEK9-209ENST00000556170 SDHCQ99643 169 aaPredicted RBP13.54□□□□□ -0.24
NEK9-209ENST00000556170 EXOGQ9Y2C4 368 aaKnown RBP13.54□□□□□ -0.24
NEK9-209ENST00000556170 TMED7-TICAM2A0A0A6YYA0 188 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 VSTM2BA6NLU5 285 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 ZNF85Q03923 595 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 DMRTC1Q5HYR2 192 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 HSD17B8Q92506 261 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 OR6C1Q96RD1 312 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 TMED7Q9Y3B3 224 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 MTCL1Q9Y4B5 1905 aaKnown RBP13.53□□□□□ -0.24
NEK9-209ENST00000556170 GBF1Q92538 1859 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 OIP5O43482 229 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 UBL3O95164 117 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 APEHP13798 732 aaKnown RBP13.53□□□□□ -0.24
NEK9-209ENST00000556170 LCN1P31025 176 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 FAPQ12884 760 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 BCL2A1Q16548 175 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 SGCAQ16586 387 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 SNX18Q96RF0 628 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 SARGQ9BW04 601 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 NUDT9Q9BW91 350 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 SEMA4CQ9C0C4 833 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 WDR76Q9H967 626 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 PLXND1Q9Y4D7 1925 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 TFP02787 698 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 CT45A8P0DMV1 189 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 CT45A9P0DMV2 189 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 PPICP45877 212 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 VEGFCP49767 419 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 EFR3AQ14156 821 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 CDK10Q15131 360 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 TOMM34Q15785 309 aaPredicted RBP13.53□□□□□ -0.24
NEK9-209ENST00000556170 CT45A2Q5DJT8 189 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 DNM1P34Q6PK57 102 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 OR13C3Q8NGS6 347 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 OR52I2Q8NH67 350 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 CASTOR1Q8WTX7 329 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 KIAA1143Q96AT1 154 aaPredicted RBP13.53□□□□□ -0.24
NEK9-209ENST00000556170 HYLS1Q96M11 299 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 UQCC2Q9BRT2 126 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 COMMD9Q9P000 198 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 KCNG2Q9UJ96 466 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 FBXL3Q9UKT7 428 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 COPS3Q9UNS2 423 aa13.53□□□□□ -0.24
NEK9-209ENST00000556170 SLC22A13Q9Y226 551 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms