RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 RNF5Q99942 180 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 GABARAPL3Q9BY60 117 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 UGT1A7Q9HAW7 530 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 UGT1A10Q9HAW8 530 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 UGT1A8Q9HAW9 530 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 HMG20AQ9NP66 347 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 MMP17Q9ULZ9 603 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 MFHAS1Q9Y4C4 1052 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 ABCC9O60706 1549 aa1.4□□□□□ -2.19
SNX6-204ENST00000555541 SF3B1O75533 1304 aaKnown RBP eCLIP1.4□□□□□ -2.19
SNX6-204ENST00000555541 ANKRD12Q6UB98 2062 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 A0A087WZY1 265 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 TCRBV9S1A1TA0A576 114 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 SGK1O00141 431 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 RGS16O15492 202 aaPredicted RBP1.39□□□□□ -2.19
SNX6-204ENST00000555541 OXSR1O95747 527 aaPredicted RBP1.39□□□□□ -2.19
SNX6-204ENST00000555541 CALCBP10092 127 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 FOLR1P15328 257 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 NAMPTP43490 491 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 ERVK-25P63136 954 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 PITPNAQ00169 270 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 NCBP1Q09161 790 aaKnown RBP1.39□□□□□ -2.19
SNX6-204ENST00000555541 AQP6Q13520 282 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 C1orf61Q13536 156 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 ISLR2Q6UXK2 745 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 NCCRP1Q6ZVX7 275 aaPredicted RBP1.39□□□□□ -2.19
SNX6-204ENST00000555541 PIANPQ8IYJ0 282 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 SLC38A6Q8IZM9 456 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 IPMKQ8NFU5 416 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 GEMIN6Q8WXD5 167 aaKnown RBP1.39□□□□□ -2.19
SNX6-204ENST00000555541 OSTF1Q92882 214 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 UFD1Q92890 307 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 CCT7Q99832 543 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 OMDQ99983 421 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 LY9Q9HBG7 655 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 PCSK1NQ9UHG2 260 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 PACSIN2Q9UNF0 486 aaPredicted RBP1.39□□□□□ -2.19
SNX6-204ENST00000555541 TNS2Q63HR2 1409 aa1.39□□□□□ -2.19
SNX6-204ENST00000555541 CEMIPQ8WUJ3 1361 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 SLC25A14O95258 325 aaPredicted RBP1.38□□□□□ -2.19
SNX6-204ENST00000555541 IL4P05112 153 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 CX3CR1P49238 355 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 SCGB2A2Q13296 93 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 DUSP7Q16829 419 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 PYHIN1Q6K0P9 492 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 BLOC1S2Q6QNY1 142 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 MREGQ8N565 214 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 FADS6Q8N9I5 356 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 OR4D5Q8NGN0 318 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 SULT4A1Q9BR01 284 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 YY1AP1Q9H869 796 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 ELOVL3Q9HB03 270 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 EXD2Q9NVH0 621 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 GPATCH2LQ9NWQ4 482 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 TMCO1Q9UM00 188 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 U3KQV3 271 aa1.38□□□□□ -2.19
SNX6-204ENST00000555541 IGHV3-74A0A0B4J1X5 117 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 IGKV1D-13A0A0B4J2D9 117 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 A0A1B0GVI7 797 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 CIB4A0PJX0 185 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 VGLL3A8MV65 326 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 A8MXQ7 604 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 BCAS1O75363 584 aaPredicted RBP1.37□□□□□ -2.19
SNX6-204ENST00000555541 UPK3AO75631 287 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 MFN2O95140 757 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 GAPDHP04406 335 aaKnown RBP1.37□□□□□ -2.19
SNX6-204ENST00000555541 IGKV1-13P0DP09 117 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 QARSP47897 775 aaKnown RBP1.37□□□□□ -2.19
SNX6-204ENST00000555541 CCR8P51685 355 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 CRYBB1P53674 252 aaPredicted RBP1.37□□□□□ -2.19
SNX6-204ENST00000555541 RPS21P63220 83 aaKnown RBP1.37□□□□□ -2.19
SNX6-204ENST00000555541 MESDQ14696 234 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 CNIH2Q6PI25 160 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 UTS2BQ765I0 119 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 PLA2G4DQ86XP0 818 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 MIR7-3HGQ8N6C7 128 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 NARS2Q96I59 477 aaKnown RBP1.37□□□□□ -2.19
SNX6-204ENST00000555541 TEKT3Q9BXF9 490 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 NHEJ1Q9H9Q4 299 aaPredicted RBP1.37□□□□□ -2.19
SNX6-204ENST00000555541 OR10H1Q9Y4A9 318 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 MYO16Q9Y6X6 1858 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 LTBP4Q8N2S1 1624 aa1.37□□□□□ -2.19
SNX6-204ENST00000555541 KRT87PA6NCN2 255 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 C16orf90A8MZG2 172 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 HSD17B6O14756 317 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 KMOO15229 486 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 CLDN3O15551 220 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 ATP5LO75964 103 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 CCNE2O96020 404 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 P0C880 135 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 STMN1P16949 149 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 GPR6P46095 362 aaPredicted RBP1.36□□□□□ -2.19
SNX6-204ENST00000555541 NPBWR2P48146 333 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 OR5I1Q13606 314 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 POU2AF1Q16633 256 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 TATDN3Q17R31 274 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 FAM78AQ5JUQ0 283 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 KDM7AQ6ZMT4 941 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 ZNF493Q6ZR52 646 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 CCDC50Q8IVM0 306 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms