RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 TRIM64CA6NLI5 447 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF724A8MTY0 619 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 EFCAB9A8MZ26 197 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 M0R129 80 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 AKAP8O43823 692 aaKnown RBP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 FZD7O75084 574 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 TNFSF13O75888 250 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 SMNDC1O75940 238 aaKnown RBP eCLIP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 OR7A10O76100 309 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 CH25HO95992 272 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 BGLAPP02818 100 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 SMIM18P0DKX4 95 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 SAGP10523 405 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 POU1F1P28069 291 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 ASCL1P50553 236 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 SLC16A1P53985 500 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 H3F3AP84243 136 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 SRSF1Q07955 248 aaKnown RBP eCLIP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 FOXF2Q12947 444 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 C1DQ13901 141 aaKnown RBP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF74Q16587 644 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 SMN1Q16637 294 aaKnown RBP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF620Q6ZNG0 422 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 TMEM99Q8N816 258 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 LRRC75AQ8NAA5 344 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 OR13C2Q8NGS9 318 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 OR5J2Q8NH18 312 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 CNIH3Q8TBE1 160 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 SGCDQ92629 289 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 SAMD8Q96LT4 415 aa9.7□□□□□ -0.86
SHMT2-218ENST00000555213 YTHDF1Q9BYJ9 559 aaKnown RBP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 MRPL39Q9NYK5 338 aaKnown RBP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 KLF2Q9Y5W3 355 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-218ENST00000555213 HECTD1Q9ULT8 2610 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF716A6NP11 495 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 BHLHE40O14503 412 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 MSTNO14793 375 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 ASAH2BP0C7U1 165 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 CD8BP10966 210 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 CRHBPP24387 322 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 KIR2DL2P43627 348 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 SNRPGP62308 76 aaKnown RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 RPS4XP62701 263 aaKnown RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 PUDPQ08623 228 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 POU4F3Q15319 338 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 GUSBP1Q15486 140 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 ZBED5Q49AG3 693 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 SLC25A30Q5SVS4 291 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 NHLRC1Q6VVB1 395 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 UEVLDQ8IX04 471 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 TUSC5Q8IXB3 177 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF100Q8IYN0 542 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 OR9K2Q8NGE7 335 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 OR51A7Q8NH64 312 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 PHF3Q92576 2039 aaKnown RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 HDAC2Q92769 488 aaKnown RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 USP9XQ93008 2570 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 APH1AQ96BI3 265 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 DDOQ99489 341 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 DIDO1Q9BTC0 2240 aaKnown RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 TSSK6Q9BXA6 273 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 OR52D1Q9H346 318 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 RASSF1Q9NS23 344 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 PARPBPQ9NWS1 579 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 PAK1IP1Q9NWT1 392 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 IL20RAQ9UHF4 553 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 ENOPH1Q9UHY7 261 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 FOXD3Q9UJU5 478 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 NOSIPQ9Y314 301 aaKnown RBP9.69□□□□□ -0.86
SHMT2-218ENST00000555213 CDH10Q9Y6N8 788 aa9.69□□□□□ -0.86
SHMT2-218ENST00000555213 MPDZO75970 2070 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 FLNCQ14315 2725 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 TRAV27A0A087WT01 109 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF814B7Z6K7 855 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 H3BN98 237 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 PRKYO43930 277 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 MRPL33O75394 65 aaKnown RBP9.68□□□□□ -0.86
SHMT2-218ENST00000555213 HTR1AP08908 422 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 ADORA3P0DMS8 318 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF43P17038 809 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 KLK2P20151 261 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 AHCYP23526 432 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 FMO3P31513 532 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 SLC9A3P48764 834 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 CDH15P55291 814 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 CXCR4P61073 352 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 IL5RAQ01344 420 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 APOFQ13790 326 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 BLMHQ13867 455 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 SLC17A1Q14916 467 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 KRT80Q6KB66 452 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 VWA1Q6PCB0 445 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 CASP12Q6UXS9 341 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 BCDIN3DQ7Z5W3 292 aaKnown RBP9.68□□□□□ -0.86
SHMT2-218ENST00000555213 LIX1LQ8IVB5 337 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF786Q8N393 782 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 LNX2Q8N448 690 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 RELL2Q8NC24 303 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-218ENST00000555213 SETD9Q8NE22 299 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms