RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 THBS1P07996 1170 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 HOXB6P17509 224 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CAPN3P20807 821 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SSTR2P30874 369 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 DLK1P80370 383 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 EFNB1P98172 346 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CYBRD1Q53TN4 286 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 DHRS7BQ6IAN0 325 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 GGHQ92820 318 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 MENTQ9BUN1 341 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 EMC6Q9BV81 110 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SPHK2Q9NRA0 654 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 RXFP3Q9NSD7 469 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 DNAJB9Q9UBS3 223 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 STEAP1Q9UHE8 339 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 INTS6Q9UL03 887 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 RNF6Q9Y252 685 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FAM183AA6NL82 134 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SLITRK5O94991 958 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 IGHV3-23P01764 117 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TGFBR1P36897 503 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 AKR1C3P42330 323 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SLC5A12Q1EHB4 618 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PIGWQ7Z7B1 504 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PAPD5Q8NDF8 572 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF519Q8TB69 540 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ELMOD3Q96FG2 381 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 AMDHD1Q96NU7 426 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 KATNBL1Q9H079 304 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 WASHC3Q9Y3C0 194 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 VSTM2BA6NLU5 285 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 MED6O75586 246 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 MAOAP21397 527 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 MTCP1P56278 107 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PARM1Q6UWI2 310 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM139Q8IV31 216 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM231Q9H6L2 316 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 RPL26L1Q9UNX3 145 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SIT1Q9Y3P8 196 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 XRN1Q8IZH2 1706 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SERPINE3A8MV23 424 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ACTL6AO96019 429 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PI3P19957 117 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 BMP6P22004 513 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ELK4P28324 431 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 HRASLS5Q96KN8 279 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 URM1Q9BTM9 101 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 MFFQ9GZY8 342 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF443Q9Y2A4 671 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ABCD4O14678 606 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PRDX6P30041 224 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CTSCP53634 463 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 UBE2G1P62253 170 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 INPP5JQ15735 1006 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF829Q3KNS6 432 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 L3MBTL4Q8NA19 623 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR7G3Q8NG95 312 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR4F6Q8NGB9 312 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 APH1BQ8WW43 257 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 NUDT9Q9BW91 350 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SLC6A20Q9NP91 592 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 NRIP3Q9NQ35 241 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SLC2A4RGQ9NR83 387 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 POMPQ9Y244 141 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 NOSIPQ9Y314 301 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TTC28Q96AY4 2481 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 PRORSD1PA6NEY8 169 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TGFB1I1O43294 461 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CSO75390 466 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SERPINE2P07093 398 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 BMP8BP34820 402 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ATP6V0D1P61421 351 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM115Q12893 351 aaPredicted RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 UBE2NLQ5JXB2 153 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CPZQ66K79 652 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ACSM6Q6P461 480 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 VWA1Q6PCB0 445 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 BMP8AQ7Z5Y6 402 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR5L1Q8NGL2 311 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 DUSP19Q8WTR2 217 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 RHOJQ9H4E5 214 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ZMAT3Q9HA38 289 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF286AQ9HBT8 521 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ACTR3BQ9P1U1 418 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 GNAZP19086 355 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 EPHA2P29317 976 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 GZMKP49863 264 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SORDQ00796 357 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF415Q09FC8 603 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FAM78AQ5JUQ0 283 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 OR4M1Q8NGD0 313 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 CANT1Q8WVQ1 401 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 UTP23Q9BRU9 249 aaKnown RBP3.06□□□□□ -1.92
SYNE2-212ENST00000554584 HPSEQ9Y251 543 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 SNX11Q9Y5W9 270 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 AKAP12Q02952 1782 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 FMN2Q9NZ56 1722 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 HMGN1P05114 100 aa3.06□□□□□ -1.92
SYNE2-212ENST00000554584 GPIP06744 558 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms