RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 PGAP1Q75T13 922 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 SSX6Q7RTT6 188 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 GJD3Q8N144 294 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 ARHGEF39Q8N4T4 335 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 STK35Q8TDR2 534 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 CTHRC1Q96CG8 243 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 TPSD1Q9BZJ3 242 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 MFFQ9GZY8 342 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 GPR27Q9NS67 375 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 SPTBP11277 2137 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 A0A1B0GTQ1 180 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 CDHR4A6H8M9 788 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 FAM183AA6NL82 134 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 SOCS6O14544 535 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 CREBL2O60519 120 aaPredicted RBP8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 SNAPC5O75971 98 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 THBS1P07996 1170 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 MAKP20794 623 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 RAD52P43351 418 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 RIDAP52758 137 aaKnown RBP8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 RAB40BQ12829 278 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 OR1Q1Q15612 314 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 PGGHGQ32M88 737 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 PRSS45Q7RTY3 260 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 CDRT4Q8N9R6 151 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 OR4N2Q8NGD1 307 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 AKR7LQ8NHP1 331 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 TRMT10AQ8TBZ6 339 aaKnown RBP8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 GTF3AQ92664 365 aaKnown RBP8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 CCDC3Q9BQI4 270 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 LRRC61Q9BV99 259 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 SLC25A32Q9H2D1 315 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 DUSP22Q9NRW4 184 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 WSB2Q9NYS7 404 aaPredicted RBP8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 ZNF223Q9UK11 482 aaPredicted RBP8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 PLEKHA6Q9Y2H5 1048 aa8.26□□□□□ -1.09
AL049839.2-201ENST00000553947 A0A0A6YYC8 382 aaPredicted RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 FAM221BA6H8Z2 402 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 SLC9B1P1A6NJY1 282 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 ZNF879B4DU55 563 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 I3L1I5 382 aaPredicted RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 CHST10O43529 356 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 IGLV3-19P01714 112 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 NID1P14543 1247 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 ACHEP22303 614 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 GCGRP47871 477 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 PPT1P50897 306 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 CCR5P51681 352 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 CASP6P55212 293 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 CDH11P55287 796 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 RAG2P55895 527 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 SLC3A1Q07837 685 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 CHAF1BQ13112 559 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 ERV3-1Q14264 604 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 DBX2Q6ZNG2 339 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 FAM122BQ7Z309 247 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 OOSP2Q86WS3 158 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 DMRTC2Q8IXT2 367 aaPredicted RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 CMIPQ8IY22 773 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 ZNF485Q8NCK3 441 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 OR52R1Q8NGF1 315 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 OSTF1Q92882 214 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 ZNF649Q9BS31 505 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 GPN1Q9HCN4 374 aaPredicted RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 HINT3Q9NQE9 182 aaKnown RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 SPACA6W5XKT8 324 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 ZC3H12DA2A288 527 aaKnown RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 TMEM218A2RU14 115 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 LRRN3E7EW58 273 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 DVL2O14641 736 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 PRAF2O60831 178 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 ICOSLGO75144 302 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 KHDRBS3O75525 346 aaKnown RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 DBIP07108 87 aaKnown RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 SFTPCP11686 197 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 S1PR1P21453 382 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 CALCRP30988 508 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 RAB38P57729 211 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 MAT1AQ00266 395 aaKnown RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 GAS6Q14393 721 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 UBXN2BQ14CS0 331 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 PON3Q15166 354 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 ZNF791Q3KP31 576 aaPredicted RBP8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 FAM76BQ5HYJ3 339 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 IZUMO1Q8IYV9 350 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 TCTEX1D2Q8WW35 142 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 RHOVQ96L33 236 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 STACQ99469 402 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 UBQLN3Q9H347 655 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 SEMA6CQ9H3T2 930 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 LRRN3Q9H3W5 708 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 MED20Q9H944 212 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 TREM1Q9NP99 234 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 PIPOXQ9P0Z9 390 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 CBLCQ9ULV8 474 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 LHX6Q9UPM6 363 aa8.25□□□□□ -1.09
AL049839.2-201ENST00000553947 A0A1W2PPC4 97 aa8.24□□□□□ -1.09
AL049839.2-201ENST00000553947 TMEM129A0AVI4 362 aa8.24□□□□□ -1.09
AL049839.2-201ENST00000553947 TRAPPC13A5PLN9 417 aa8.24□□□□□ -1.09
AL049839.2-201ENST00000553947 BRINP1O60477 761 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms