RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SLC25A44Q96H78 314 aaPredicted RBP12.22□□□□□ -0.45
TUBB3-202ENST00000553656 MED18Q9BUE0 208 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 BDH2Q9BUT1 245 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 ACTR6Q9GZN1 396 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 OR10A4Q9H209 315 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 MGAT4BQ9UQ53 548 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 SIGLEC7Q9Y286 467 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 SPTAN1Q13813 2472 aaKnown RBP12.22□□□□□ -0.45
TUBB3-202ENST00000553656 ICE1Q9Y2F5 2266 aa12.22□□□□□ -0.45
TUBB3-202ENST00000553656 SH3D21A4FU49 640 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ARRDC5A6NEK1 342 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ERICH4A6NGS2 130 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 A6NIZ1 184 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 NPIPB13A6NJU9 1138 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 NPIPB4C9JG80 1138 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 M0R3G1 203 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 CASKO14936 926 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 KLF4O43474 513 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 UPK3AO75631 287 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 NR2C1P13056 603 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 COX5AP20674 150 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 GSTM3P21266 225 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 HOXC12P31275 282 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 SLC6A6P31641 620 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 CCKARP32238 428 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 GSSP48637 474 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 IST1P53990 364 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 RAP1BP61224 184 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 RPL27P61353 136 aaKnown RBP12.21□□□□□ -0.45
TUBB3-202ENST00000553656 RAP1AP62834 184 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ROR2Q01974 943 aaKnown RBP12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ATP6AP1Q15904 470 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 C9orf135Q5VTT2 229 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ANKRD34AQ69YU3 496 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 RPL13AP3Q6NVV1 102 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 C20orf196Q8IYI0 205 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 TMEM123Q8N131 208 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 OR52L1Q8NGH7 329 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 LINC01560Q8TB33 94 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 FAM222BQ8WU58 562 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 PYDC1Q8WXC3 89 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ASB10Q8WXI3 467 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 GTPBP3Q969Y2 492 aaKnown RBP12.21□□□□□ -0.45
TUBB3-202ENST00000553656 LRR1Q96L50 414 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 DACH2Q96NX9 599 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 KATNB1Q9BVA0 655 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ULBP2Q9BZM5 246 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 TXNIPQ9H3M7 391 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ZNF556Q9HAH1 456 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 ZNF226Q9NYT6 803 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 PDP1Q9P0J1 537 aaPredicted RBP12.21□□□□□ -0.45
TUBB3-202ENST00000553656 GRHPRQ9UBQ7 328 aa12.21□□□□□ -0.45
TUBB3-202ENST00000553656 USP9YO00507 2555 aaPredicted RBP12.2□□□□□ -0.46
TUBB3-202ENST00000553656 XKRYO14609 159 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 RAD51DO75771 328 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 IGHMP01871 453 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 CD14P08571 375 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 ACADSP16219 412 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 CDH2P19022 906 aaPredicted RBP12.2□□□□□ -0.46
TUBB3-202ENST00000553656 RPS6KA3P51812 740 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 SH3BGRP55822 239 aaPredicted RBP12.2□□□□□ -0.46
TUBB3-202ENST00000553656 ERVK-25P63136 954 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 LGALS3BPQ08380 585 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 TSC22D1Q15714 1073 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 STK11Q15831 433 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 OR7E24Q6IFN5 339 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF770Q6IQ21 691 aaPredicted RBP12.2□□□□□ -0.46
TUBB3-202ENST00000553656 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 NHLRC1Q6VVB1 395 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF620Q6ZNG0 422 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 LRRC75AQ8NAA5 344 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 C1orf162Q8NEQ5 155 aaPredicted RBP12.2□□□□□ -0.46
TUBB3-202ENST00000553656 STMN2Q93045 179 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 S100PBPQ96BU1 408 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 ZC3HAV1LQ96H79 300 aaKnown RBP12.2□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF570Q96NI8 536 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 GPA33Q99795 319 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 OR52D1Q9H346 318 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 DENND2DQ9H6A0 471 aaPredicted RBP12.2□□□□□ -0.46
TUBB3-202ENST00000553656 CRIM1Q9NZV1 1036 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 KIF17Q9P2E2 1029 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 KCNN3Q9UGI6 736 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 BAHCC1Q9P281 2608 aa12.2□□□□□ -0.46
TUBB3-202ENST00000553656 CENPBD1B2RD01 187 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 PTP4A3O75365 173 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 GASTP01350 101 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 ITGA5P08648 1049 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 ACVR1BP36896 505 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 CD47Q08722 323 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 FHL1Q13642 323 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 RFX4Q33E94 735 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 ARMC4Q5T2S8 1044 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 GPR139Q6DWJ6 353 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 SHQ1Q6PI26 577 aaKnown RBP12.19□□□□□ -0.46
TUBB3-202ENST00000553656 DPY19L2P2Q6ZN68 376 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 P2RY8Q86VZ1 359 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF433Q8N7K0 673 aaPredicted RBP12.19□□□□□ -0.46
TUBB3-202ENST00000553656 ATG16L2Q8NAA4 619 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms